aux_functions.h
rostlab/
aux__functions_8h.html
rostlab
blosum62.h
rostlab/
blosum62_8h.html
rostlab
cwd_resource.h
rostlab/
cwd__resource_8h.html
rostlab::cwd_resource
rostlab
cxxgrp.h
rostlab/
cxxgrp_8h.html
rostlab/rostlab_stdexcept.h
rostlab::cxx_group
rostlab::gid_not_found_error
rostlab::gname_not_found_error
rostlab
cxxpwd.h
rostlab/
cxxpwd_8h.html
rostlab/rostlab_stdexcept.h
rostlab::cxx_passwd
rostlab::uid_not_found_error
rostlab::uname_not_found_error
rostlab
euid_egid_resource.h
rostlab/
euid__egid__resource_8h.html
rostlab/rostlab_stdexcept.h
rostlab::euid_egid_resource
rostlab
file_lock_resource.h
rostlab/
file__lock__resource_8h.html
rostlab/rostlab_stdexcept.h
rostlab::file_lock_resource
rostlab::file_lock_resource::wouldblock
rostlab
mapAA2int.h
rostlab/
mapAA2int_8h.html
rostlab/rostlab_stdexcept.h
rostlab
readFasta.h
rostlab/
readFasta_8h.html
rostlab/rostlab_stdexcept.h
rostlab::bio::fmt::fasta
rostlab::bio::seq
rostlab
rostlab::bio
rostlab::bio::fmt
rostlab_stdexcept.h
rostlab/
rostlab__stdexcept_8h.html
rostlab::error_backtracer
rostlab::exception
rostlab::runtime_error
rostlab
rostlab_stdio.h
rostlab/
rostlab__stdio_8h.html
rostlab
rostlab_stdlib.h
rostlab/
rostlab__stdlib_8h.html
rostlab
umask_resource.h
rostlab/
umask__resource_8h.html
rostlab::umask_resource
rostlab
rostlab::cwd_resource
classrostlab_1_1cwd__resource.html
- cwd_resource
  classrostlab_1_1cwd__resource.html
  ae5c43efbdd4a1d51e947edd8e246b9f6
  ()
- cwd_resource
  classrostlab_1_1cwd__resource.html
  a6e9e025a23f6036a89dff1d1b38d6cdc
  (const string &__dirname)
- void acquire classrostlab_1_1cwd__resource.html aaaba77e629ed7e9772862ddfdeb017a2 (const string &__dirname)
- void release classrostlab_1_1cwd__resource.html a76d4e40a4a5e238c6045d07d0d9b5fab ()
- virtual ~cwd_resource classrostlab_1_1cwd__resource.html a1016094c7ddc790ce4f9abd49ff60ef9 ()
rostlab::cxx_group
structrostlab_1_1cxx__group.html
- cxx_group
  structrostlab_1_1cxx__group.html
  a9691266d20b50a3fb5850c51450e18a3
  ()
- cxx_group
  structrostlab_1_1cxx__group.html
  a82514ee8b57e8f1f13dae7baf9533c2d
  (const std::string &__gr_name)
- cxx_group
  structrostlab_1_1cxx__group.html
  ab499600062ff16116a2f4edb1b37d7b7
  (const std::string &__gr_name, const std::string &__gr_passwd, gid_t __gr_gid, const std::vector< std::string > &__gr_mem)
- cxx_group
  structrostlab_1_1cxx__group.html
  a58ad049dab2f0d10f7385dbe7d717540
  (const std::string &__gr_name, const std::string &__gr_passwd, gid_t __gr_gid, char **__gr_mem)
- std::string gr_name structrostlab_1_1cxx__group.html a427336934dc52ff1214b6d6042c25dc1
- std::string gr_passwd structrostlab_1_1cxx__group.html a474da2a726ac20bc25fbae6ba3ecb271
- gid_t gr_gid structrostlab_1_1cxx__group.html a734bfe3fbdb95ba96f80c1e563ee28d0
- std::vector< std::string > gr_mem structrostlab_1_1cxx__group.html a0628779b6c9912f008d2de2fcd9a5657
rostlab::cxx_passwd
structrostlab_1_1cxx__passwd.html
- cxx_passwd
  structrostlab_1_1cxx__passwd.html
  a4f59d556cf5e34b68d96c4fc777ae75d
  ()
- cxx_passwd
  structrostlab_1_1cxx__passwd.html
  a8b043b32463d1c5d0194c481074dcdee
  (const std::string &__pw_name, const std::string &__pw_passwd, uid_t __pw_uid, gid_t __pw_gid, const std::string &__pw_gecos, const std::string &__pw_dir, const std::string &__pw_shell)
- std::string pw_name structrostlab_1_1cxx__passwd.html abacee95470c53e00d3f1b2f6a0597dc2
- std::string pw_passwd structrostlab_1_1cxx__passwd.html a94f7a8d47204fa45f279772183c8f78f
- uid_t pw_uid structrostlab_1_1cxx__passwd.html a8289f121b7a831f054c74c66c73011f2
- gid_t pw_gid structrostlab_1_1cxx__passwd.html a204ff42f127df263fe685cc18250a2d8
- std::string pw_gecos structrostlab_1_1cxx__passwd.html a784fea65098876572ad4b466d26c42d5
- std::string pw_dir structrostlab_1_1cxx__passwd.html ac4891dcbd93c8d25534fbeedf86615dd
- std::string pw_shell structrostlab_1_1cxx__passwd.html a16e163fac8f3ed6a1a2d0b84547958ff
rostlab::error_backtracer
classrostlab_1_1error__backtracer.html
- error_backtracer
  classrostlab_1_1error__backtracer.html
  a954cd9790524fba511130fd731452a4a
  ()
- virtual ~error_backtracer classrostlab_1_1error__backtracer.html afc94258605703ac974c8b63a9e439503 ()
- virtual const std::string & backtrace classrostlab_1_1error__backtracer.html a8b2b10a71e3a7e077a087832c006faab () const
rostlab::euid_egid_resource
classrostlab_1_1euid__egid__resource.html
- euid_egid_resource
  classrostlab_1_1euid__egid__resource.html
  a7353ffb9ecd9be388358e31a94a6156a
  (uid_t __neweuid, gid_t __newegid)
- virtual ~euid_egid_resource classrostlab_1_1euid__egid__resource.html a8fc5694634d053e2ac33c44dc6d9b82c ()
rostlab::exception
classrostlab_1_1exception.html
rostlab::error_backtracer
- exception
  classrostlab_1_1exception.html
  a1596c861a6c614b3afa21988f31980a5
  ()
rostlab::bio::fmt::fasta
classrostlab_1_1bio_1_1fmt_1_1fasta.html
rostlab::file_lock_resource
classrostlab_1_1file__lock__resource.html
rostlab::file_lock_resource::wouldblock
- file_lock_resource
  classrostlab_1_1file__lock__resource.html
  a63b6dcf25b89477a2aa955784c1794de
  ()
- file_lock_resource
  classrostlab_1_1file__lock__resource.html
  ab6158e44d2ba1c8a7cfde023528e747a
  (const std::string &__file, const std::string &__mode="r", int __cmd=F_SETLKW, short __type=F_RDLCK, bool __dbg=false)
- void acquire classrostlab_1_1file__lock__resource.html a9de00c0eb0e542bbe371c0797a1f9773 (const std::string &__file, const std::string &__mode="r", int __cmd=F_SETLKW, short __type=F_RDLCK, bool __dbg=false)
- void release classrostlab_1_1file__lock__resource.html a68d25c1369090e405c131194f283fb47 ()
- virtual ~file_lock_resource classrostlab_1_1file__lock__resource.html aa4d069550b695ecfeb968549b8f986ea ()
- operator FILE *
  classrostlab_1_1file__lock__resource.html
  a10a955c4ac0ac80f25b51f6e7ee7d897
  ()
- const std::string & filename classrostlab_1_1file__lock__resource.html a4bb7790e14592594b93d6495cb86090e () const
- bool dbg classrostlab_1_1file__lock__resource.html a8ac613e50acee0ae3b0dee462e710d87
rostlab::gid_not_found_error
classrostlab_1_1gid__not__found__error.html
rostlab::runtime_error
- gid_not_found_error
  classrostlab_1_1gid__not__found__error.html
  af81fee1bd71a74ae9d2dd581447eb822
  (const std::string &what)
rostlab::gname_not_found_error
classrostlab_1_1gname__not__found__error.html
rostlab::runtime_error
- gname_not_found_error
  classrostlab_1_1gname__not__found__error.html
  a74583ec523ad15284b7d98deb801486a
  (const std::string &what)
rostlab::runtime_error
classrostlab_1_1runtime__error.html
rostlab::error_backtracer
- runtime_error
  classrostlab_1_1runtime__error.html
  a12f6c3bdc64d8082bcd94ddda17a5088
  (const std::string &__msg)
rostlab::bio::seq
classrostlab_1_1bio_1_1seq.html
typename _FmtT
- seq
  classrostlab_1_1bio_1_1seq.html
  a40cd59c92b826690539b6939d7cbf187
  ()
- seq
  classrostlab_1_1bio_1_1seq.html
  a587ed08a50edb336b6abce97f8e8ec69
  (const std::string &__desc, const std::string &__display_id, const std::string &__seqstr)
- virtual ~seq classrostlab_1_1bio_1_1seq.html a309929c43a09069376761a5320a1d38b ()
- std::string & seqstr classrostlab_1_1bio_1_1seq.html a07d8d0d79452e4d494ec9e4d464c8b0f ()
rostlab::uid_not_found_error
classrostlab_1_1uid__not__found__error.html
rostlab::runtime_error
- uid_not_found_error
  classrostlab_1_1uid__not__found__error.html
  a36c9832c95ab3b8feaea841a5ef255e3
  (const std::string &what)
rostlab::umask_resource
classrostlab_1_1umask__resource.html
- umask_resource
  classrostlab_1_1umask__resource.html
  a4c2bb8b67e8abce97f15e46dbf2f9369
  (mode_t __new_mode)
- virtual ~umask_resource classrostlab_1_1umask__resource.html a0ca29ff91afcb14eacc724f07fa35cf3 ()
rostlab::uname_not_found_error
classrostlab_1_1uname__not__found__error.html
rostlab::runtime_error
- uname_not_found_error
  classrostlab_1_1uname__not__found__error.html
  a8695b726f2f031516c2d6faf07f9a42f
  (const std::string &what)
rostlab::file_lock_resource::wouldblock
classrostlab_1_1file__lock__resource_1_1wouldblock.html
rostlab::exception
rostlab
namespacerostlab.html
rostlab::bio
rostlab::cwd_resource
rostlab::cxx_group
rostlab::gid_not_found_error
rostlab::gname_not_found_error
rostlab::cxx_passwd
rostlab::uid_not_found_error
rostlab::uname_not_found_error
rostlab::euid_egid_resource
rostlab::file_lock_resource
rostlab::error_backtracer
rostlab::exception
rostlab::runtime_error
rostlab::umask_resource
- std::vector< std::string > argvec_type namespacerostlab.html a5d5704df6d732643202079117bd161aa
- std::basic_string< _Tp > join namespacerostlab.html acd045971114dbf5cd4f6df62b2909763 (const std::basic_string< _Tp > &__sep, typename std::vector< std::basic_string< _Tp > >::const_iterator __begin, typename std::vector< std::basic_string< _Tp > >::const_iterator __end)
- std::basic_string< _Tp > join namespacerostlab.html a4cc11bf445b33bd20043a83fd15a7fad (const std::basic_string< _Tp > &__sep, const std::vector< std::basic_string< _Tp > > &__v)
- std::basic_string< _Tp > join namespacerostlab.html aa1cd58643b80c6868ae9ef0643632399 (const _Tp *__sep, const std::vector< std::basic_string< _Tp > > &__v)
- std::basic_string< _Tp > join namespacerostlab.html a9e6fb3ec0c1c08a50369c99cbd8c4629 (const _Tp __sep, const std::vector< std::basic_string< _Tp > > &__v)
- std::vector< std::string > split namespacerostlab.html ad802fccb3a9e50fccd205c63c4a23b31 (const std::string &__str, char __c)
- std::vector< _Tk > map_keys namespacerostlab.html aefcb5066948f32070f50f4881edc485b (const std::map< _Tk, _Tv > &__map)
- void split_in_2 namespacerostlab.html affc2fcc160ce31ad5082165e30386bf8 (const std::string &__str, char __c, std::string &__left, std::string &__right)
- std::map< std::string, std::string > map_split_in_2 namespacerostlab.html a91adff26f1b2083569a02e796ad973ee (const std::vector< std::string > &__svec, char __c)
- std::ostream & operator<< namespacerostlab.html acfcfa0e42c2d3360825763d378d55f48 (std::ostream &os, const std::pair< _T1, _T2 > &v)
- std::ostream & operator<< namespacerostlab.html a1536cd40276ab644975a419d72b258d4 (std::ostream &os, const std::map< K, V, C, A > &m)
- std::ostream & operator<< namespacerostlab.html ada567fd69475a17799e6b20008b1ca8b (std::ostream &os, const std::vector< _Tp, _Alloc > &v)
- std::string getgrgid_r namespacerostlab.html a5d1ec47ffbbe61fb180727755b66e5fd (gid_t __gid)
- std::string getgrgid_r namespacerostlab.html a5f1c0e72549b6d443d8a3489d556e5a0 (gid_t __gid, cxx_group &__group)
- gid_t getgrnam_r namespacerostlab.html ab3f6bd9535c534b2520cc29cefe24f96 (const std::string &__gname)
- gid_t getgrnam_r namespacerostlab.html a1c0e17f4c40c2a606ece0c738ed7db4a (const std::string &__gname, struct cxx_group &__group)
- uid_t getpwnam_r namespacerostlab.html a62d3cb7cc23f549ac6be0553b5e8b6cc (const std::string &__uname)
- uid_t getpwnam_r namespacerostlab.html a7f8c05ae5022a5f40430f3292f6d9d5b (const std::string &__uname, cxx_passwd &__passwd)
- std::string getpwuid_r namespacerostlab.html a5bd7753ca4fefb153fb82735914ae9e2 (uid_t __uid)
- std::string getpwuid_r namespacerostlab.html a59e1518719c4c52ad8b82465982cbfce (uid_t __uid, cxx_passwd &__passwd)
- char int2AAchar namespacerostlab.html ad703b2f18ceae63b4750873ab17906c4 (int __aanum)
- int AAchar2int namespacerostlab.html abd71bb3c8e7041154b336e0121c1a5ac (char __aachar)
- void fwrite namespacerostlab.html a4142aa716350618099dc43cbde7ff9c8 (const _Tp &__v, FILE *__out)
- void fwrite namespacerostlab.html a7994889fa834b6fba6b04ae554a3cf86 (const vector< _Tp, _Alloc > &__v, FILE *__out)
- void fwrite< string > namespacerostlab.html ae087c0cc911d6c7c35f946cbbae5d544 (const string &__str, FILE *__out)
- void fwrite namespacerostlab.html a6a84b717a5650baa50e834b04d693c81 (const char *__c, FILE *__out)
- void fread namespacerostlab.html a64156d88f0acfe509fc06160c58f0412 (_Tp &__v, FILE *__in)
- void fread namespacerostlab.html a95af69989f9a12888e3078fcfb7c3f6c (vector< _Tp, _Alloc > &__v, FILE *__in)
- void fread< string > namespacerostlab.html a8d344e8879fe0541a39cc8718a84a24f (string &__v, FILE *__in)
- _Tp fread namespacerostlab.html acbd2da49f65dd3f94bdfe497a33a4688 (FILE *__in)
- argvec_type mkargvec namespacerostlab.html a363b61f71bc972e21507fe58342f81c0 (const char *__path,...)
- bool file_exists namespacerostlab.html a37cdf454adbb6e299072099bfec119b4 (const std::string &__path)
- int system namespacerostlab.html a496af39360313209d5d1a472a34ce781 (const char *__path,...)
- int system namespacerostlab.html a4d5a14d288cfd133049ec15a4363a543 (const std::vector< std::string > &__args)
- std::string tolower namespacerostlab.html a0f03eed25884fd80b381c79daae5a9d1 (std::string __str)
- const signed char blosum62 namespacerostlab.html afcb6728a937626e7b1678b9f18caab20 [27][27]
rostlab::bio
namespacerostlab_1_1bio.html
rostlab::bio::fmt
rostlab::bio::seq
- std::istream & operator>> namespacerostlab_1_1bio.html a446260646598ef9f1868f3183ce3a6bd (std::istream &__is, bio::seq< bio::fmt::fasta > &__seq)
rostlab::bio::fmt
namespacerostlab_1_1bio_1_1fmt.html
rostlab::bio::fmt::fasta
rostlab
rostlab/
dir_b7a5fe10b55060f48179abd50ad1f335.html
aux_functions.h
blosum62.h
cwd_resource.h
cxxgrp.h
cxxpwd.h
euid_egid_resource.h
file_lock_resource.h
mapAA2int.h
readFasta.h
rostlab_stdexcept.h
rostlab_stdio.h
rostlab_stdlib.h
umask_resource.h