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pappso::ProteinIntegerCode Member List

This is the complete list of members for pappso::ProteinIntegerCode, including all inherited members.

computePeptideCodeFragments(const AaStringCodec &codec, std::size_t fragment_size) const | pappso::ProteinIntegerCode | private
convolution(const std::vector< uint32_t > &code_list_from_spectrum) const | pappso::ProteinIntegerCode |
convolutionKernel(const std::vector< uint32_t > &spectrum_code_list, std::vector< std::uint8_t >::const_iterator it_aa, std::vector< std::uint32_t >::const_iterator it_couple, std::vector< std::uint32_t >::const_iterator it_trio, std::vector< std::uint32_t >::const_iterator it_quatro, std::vector< std::uint32_t >::const_iterator it_cinqo) const | pappso::ProteinIntegerCode | private
getPeptideCodedFragment(std::size_t size) const | pappso::ProteinIntegerCode |
getProteinSp() const | pappso::ProteinIntegerCode |
getSeqAaCode() const | pappso::ProteinIntegerCode |
m_peptideCodedFragments | pappso::ProteinIntegerCode | private
m_seqAaCode | pappso::ProteinIntegerCode | private
match(const std::vector< uint32_t > &code_list) const | pappso::ProteinIntegerCode |
msp_protein | pappso::ProteinIntegerCode | private
ProteinIntegerCode(ProteinSp protein, const AaStringCodec &codec, std::size_t aa_str_max_size=5) | pappso::ProteinIntegerCode |
ProteinIntegerCode(const ProteinIntegerCode &other) | pappso::ProteinIntegerCode |
~ProteinIntegerCode() | pappso::ProteinIntegerCode | virtual