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pappso::Peptide Member List

This is the complete list of members for pappso::Peptide, including all inherited members.

addAaModification(AaModificationP aaModification, unsigned int position) | pappso::Peptide |
addAaModificationOnAllAminoAcid(AaModificationP aaModification, AminoAcidChar amino_acid) | pappso::Peptide |
begin() | pappso::Peptide |
begin() const | pappso::Peptide |
countModificationOnAa(AaModificationP mod, const std::vector< char > &aa_list) const | pappso::Peptide |
end() | pappso::Peptide |
end() const | pappso::Peptide |
getAa(unsigned int position) | pappso::Peptide |
getAaPositionList(char aa) const | pappso::Peptide |
getAaPositionList(std::list< char > list_aa) const | pappso::Peptide |
getConstAa(unsigned int position) const | pappso::Peptide |
getFormula(unsigned int charge) const final | pappso::PeptideInterface | virtual
getInternalCterModification() const | pappso::Peptide |
getInternalNterModification() const | pappso::Peptide |
getLiAbsoluteString() const | pappso::Peptide |
getMass() | pappso::Peptide |
getMass() const override | pappso::Peptide | virtual
getModificationPositionList(AaModificationP mod) const | pappso::Peptide |
getModificationPositionList(AaModificationP mod, const std::vector< char > &aa_list) const | pappso::Peptide |
getMz(unsigned int charge) const final | pappso::Ion | virtual
getName() const | pappso::PeptideInterface | inline virtual
getNumberOfAtom(AtomIsotopeSurvey atom) const override | pappso::Peptide | virtual
getNumberOfIsotope(Isotope isotope) const override | pappso::Peptide | virtual
getNumberOfModification(AaModificationP mod) const | pappso::Peptide |
getSequence() const override | pappso::Peptide | virtual
getSequenceLi() const | pappso::PeptideInterface | virtual
Ion() | pappso::Ion |
isPalindrome() const override | pappso::Peptide | virtual
m_aaVec | pappso::Peptide | protected
m_proxyMass | pappso::Peptide | protected
makeNoConstPeptideSp() const | pappso::Peptide |
makePeptideSp() const | pappso::Peptide |
matchPeak(PrecisionPtr precision, pappso_double peak_mz, unsigned int charge) const final | pappso::PeptideInterface | inline virtual
operator< | pappso::Peptide | friend
operator== | pappso::Peptide | friend
Peptide(const QString &pepstr) | pappso::Peptide |
Peptide(const Peptide &peptide) | pappso::Peptide |
Peptide(Peptide &&toCopy) | pappso::Peptide |
PeptideProFormaParser | pappso::Peptide | friend
rbegin() const | pappso::Peptide |
removeAaModification(AaModificationP mod) | pappso::Peptide |
removeCterAminoAcid() | pappso::Peptide |
removeInternalCterModification() | pappso::Peptide |
removeInternalNterModification() | pappso::Peptide |
removeNterAminoAcid() | pappso::Peptide |
rend() const | pappso::Peptide |
replaceAaModification(AaModificationP oldmod, AaModificationP newmod) | pappso::Peptide |
replaceLeucineIsoleucine() | pappso::Peptide |
reverse() | pappso::Peptide |
rotate() | pappso::Peptide |
setInternalCterModification(AaModificationP mod) | pappso::Peptide |
setInternalNterModification(AaModificationP mod) | pappso::Peptide |
size() const override | pappso::Peptide | virtual
toAbsoluteString() const | pappso::Peptide |
toProForma() const | pappso::Peptide |
toString() const | pappso::Peptide |
~Ion() | pappso::Ion |
~Peptide() | pappso::Peptide | virtual