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pappso::MsRunXicExtractorDiskBuffer Member List

This is the complete list of members for pappso::MsRunXicExtractorDiskBuffer, including all inherited members.

acquireSlices(const MzRange &mz_range) | pappso::MsRunXicExtractorDisk | protected
appendSliceInBuffer(unsigned int slice_number, MassSpectrum &spectrum, std::size_t ipos) | pappso::MsRunXicExtractorDiskBuffer | protected
appendSliceOnDisk(unsigned int slice_number, MassSpectrum &spectrum, std::size_t ipos) | pappso::MsRunXicExtractorDisk | protected
endPwizRead() override | pappso::MsRunXicExtractorDiskBuffer | protected virtual
extractOneXicCoord(XicCoord &xic_coord) | pappso::MsRunXicExtractorDisk | private
extractXicCoordSPtrList(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) final | pappso::MsRunXicExtractorInterface | virtual
extractXicCoordSPtrListParallelized(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) final | pappso::MsRunXicExtractorInterface | virtual
flushBufferOnDisk() | pappso::MsRunXicExtractorDiskBuffer | protected
getMsRunId() const | pappso::MsRunXicExtractorInterface |
getMsRunReaderSPtr() const | pappso::MsRunXicExtractorInterface |
getXicFromPwizMSDataFile(std::vector< Xic * > &xic_list, const std::vector< MzRange > &mass_range_list, pappso::pappso_double rt_begin, pappso::pappso_double rt_end) | pappso::MsRunXicExtractor | protected virtual
m_bufferMaxSize | pappso::MsRunXicExtractorDiskBuffer | protected
m_bufferSize | pappso::MsRunXicExtractorDiskBuffer | protected
m_maxMz | pappso::MsRunXicExtractorDisk | protected
m_minMz | pappso::MsRunXicExtractorDisk | protected
m_msrun_points | pappso::MsRunXicExtractor | protected
m_msRunSliceListCache | pappso::MsRunXicExtractorDisk | protected
m_mutex | pappso::MsRunXicExtractorDisk | protected
m_retentionTimeAroundTarget | pappso::MsRunXicExtractorInterface | protected
m_retentionTimeList | pappso::MsRunXicExtractorDisk | protected
m_rtSize | pappso::MsRunXicExtractorDisk | protected
m_sliceBufferMap | pappso::MsRunXicExtractorDiskBuffer | protected
m_temporaryDirectory | pappso::MsRunXicExtractorDisk | protected
m_xicExtractMethod | pappso::MsRunXicExtractorInterface | protected
mcsp_postExtractionTraceFilter | pappso::MsRunXicExtractorInterface | protected
mpa_temporaryDirectory | pappso::MsRunXicExtractorDisk | protected
msp_msrun_reader | pappso::MsRunXicExtractorInterface | protected
MsRunXicExtractor(const MsRunXicExtractor &other) | pappso::MsRunXicExtractor |
MsRunXicExtractor(MsRunReaderSPtr &msrun_reader) | pappso::MsRunXicExtractor | protected
MsRunXicExtractorDisk(MsRunReaderSPtr &msrun_reader) | pappso::MsRunXicExtractorDisk |
MsRunXicExtractorDisk(const MsRunXicExtractorDisk &other) | pappso::MsRunXicExtractorDisk |
MsRunXicExtractorDisk(MsRunReaderSPtr &msrun_reader, const QDir &temporary_dir) | pappso::MsRunXicExtractorDisk | protected
MsRunXicExtractorDiskBuffer(const MsRunXicExtractorDiskBuffer &other) | pappso::MsRunXicExtractorDiskBuffer |
MsRunXicExtractorDiskBuffer(MsRunReaderSPtr &msrun_reader, const QDir &temporary_dir) | pappso::MsRunXicExtractorDiskBuffer | protected
MsRunXicExtractorFactory | pappso::MsRunXicExtractorDiskBuffer | private
MsRunXicExtractorInterface(MsRunReaderSPtr &msrun_reader) | pappso::MsRunXicExtractorInterface | protected
MsRunXicExtractorInterface(const MsRunXicExtractorInterface &other) | pappso::MsRunXicExtractorInterface | protected
postExtractionProcess(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end) | pappso::MsRunXicExtractorInterface | protected virtual
prepareExtractor() | pappso::MsRunXicExtractorDisk | protected
protectedExtractXicCoordSPtrList(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end) override | pappso::MsRunXicExtractorDisk | protected virtual
serializeMsRun() | pappso::MsRunXicExtractorDisk | protected
setPostExtractionTraceFilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter) | pappso::MsRunXicExtractorInterface |
setRetentionTimeAroundTarget(double range_in_seconds) | pappso::MsRunXicExtractorInterface |
setXicExtractMethod(XicExtractMethod method) | pappso::MsRunXicExtractorInterface |
storeSlices(std::map< unsigned int, MassSpectrum > &slice_vector, std::size_t ipos) override | pappso::MsRunXicExtractorDiskBuffer | protected virtual
unserializeSlice(unsigned int slice_number) | pappso::MsRunXicExtractorDisk | protected
~MsRunXicExtractor() | pappso::MsRunXicExtractor | virtual
~MsRunXicExtractorDisk() | pappso::MsRunXicExtractorDisk | virtual
~MsRunXicExtractorDiskBuffer() | pappso::MsRunXicExtractorDiskBuffer | virtual
~MsRunXicExtractorInterface() | pappso::MsRunXicExtractorInterface | protected virtual