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peptidemodel.h File Reference

SpecGlobTool peptide model. More...

`#include "../../peptide/peptide.h"`
`#include "../../massspectrum/qualifiedmassspectrum.h"`
`#include "types.h"`
`#include "../../exportinmportconfig.h"`

Go to the source code of this file.

## Classes

struct | pappso::specglob::AminoAcidModel
struct | pappso::specglob::TheoreticalPeakDataPoint
class | pappso::specglob::PeptideModel

## Namespaces

namespace | pappso
| tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge
namespace | pappso::specglob

## Detailed Description

SpecGlobTool peptide model.

Date
  14/11/2023

Author
  Olivier Langella

C++ implementation of the SpecGlob algorithm described in :

1. Prunier, G. et al. Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides. BMC Bioinformatics 24, 421 (2023).

   HAL Id : hal-04296170 , version 1 Mot de passe : hxo20cl DOI : 10.1186/s12859-023-05555-y

Date
  14/11/2023

Author
  Olivier Langella

Todo:
  https://www.psidev.info/proforma

C++ implementation of the SpecGlob algorithm described in :

1. Prunier, G. et al. Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides. BMC Bioinformatics 24, 421 (2023).

   HAL Id : hal-04296170 , version 1 Mot de passe : hxo20cl DOI : 10.1186/s12859-023-05555-y

Definition in file peptidemodel.h.