Loading...
Searching...
No Matches
pappso::specglob::SpectralAlignment Member List

This is the complete list of members for pappso::specglob::SpectralAlignment, including all inherited members.

align(PeptideSpectraCsp peptide_spectrum, ExperimentalSpectrumCsp experimental_spectrum) | pappso::specglob::SpectralAlignment |
backTrack() const | pappso::specglob::SpectralAlignment |
buildPeptideModel() const | pappso::specglob::SpectralAlignment |
fillMassDelta(const PeptideSpectrum &peptide_spectrum, const ExperimentalSpectrum &experimental_spectrum) | pappso::specglob::SpectralAlignment | private
fillMatricesWithScores(const boost::numeric::ublas::matrix< SpectralAlignmentDataPoint >::iterator2 &it_pos, const PeptideSpectrum &peptide_spectrum, const ExperimentalSpectrum &experimental_spectrum) | pappso::specglob::SpectralAlignment | private
getBestRealignScore(const boost::numeric::ublas::matrix< SpectralAlignmentDataPoint >::iterator2 &it_pos, std::size_t expeIndicesK, int reAlignScore, int alignScoreToAdd) | pappso::specglob::SpectralAlignment | private
getExperimentalSpectrumCsp() const | pappso::specglob::SpectralAlignment |
getExperimentalSpectrumDataPoint(const boost::numeric::ublas::matrix< SpectralAlignmentDataPoint >::iterator2 &itpos) const | pappso::specglob::SpectralAlignment | private
getMatrix() const | pappso::specglob::SpectralAlignment |
getMaxPosIterator() const | pappso::specglob::SpectralAlignment |
getMaxScore() const | pappso::specglob::SpectralAlignment |
getPeptideSpectraCsp() const | pappso::specglob::SpectralAlignment |
getPrecursorMzDelta() const | pappso::specglob::SpectralAlignment |
getScoreRow(std::size_t row_indice) const | pappso::specglob::SpectralAlignment |
m_BETTER_END_RA | pappso::specglob::SpectralAlignment | private
m_itPosMax | pappso::specglob::SpectralAlignment | private
m_matrix | pappso::specglob::SpectralAlignment | private
m_maxScore | pappso::specglob::SpectralAlignment | private
m_precisionPtr | pappso::specglob::SpectralAlignment | private
m_precursorMassDelta | pappso::specglob::SpectralAlignment | private
m_scoreValues | pappso::specglob::SpectralAlignment | private
mcsp_experimentalSpectrum | pappso::specglob::SpectralAlignment | private
mcsp_peptideSpectrum | pappso::specglob::SpectralAlignment | private
SpectralAlignment(ScoreValues score_values, pappso::PrecisionPtr precision_ptr) | pappso::specglob::SpectralAlignment |
~SpectralAlignment() | pappso::specglob::SpectralAlignment |