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pappso::TimsFrameType1 Member List

This is the complete list of members for pappso::TimsFrameType1, including all inherited members.

checkScanNum(std::size_t scanNum) const | pappso::TimsFrameBase |
copyAndLzfDecompress(const char *src, std::size_t len) | pappso::TimsFrameType1 | private
cumulateScan(std::size_t scanNum, std::map< quint32, quint32 > &accumulate_into) const override | pappso::TimsFrameType1 | protected virtual
cumulateScan2(std::size_t scanNum, std::map< quint32, quint32 > &accumulate_into, double mz_range_begin, double mz_range_end, quint32 accepted_tof_index_range_begin, quint32 accepted_tof_index_range_end) const | pappso::TimsFrame | protected virtual
cumulateScansInRawMap(std::map< quint32, quint32 > &rawSpectrum, std::size_t scanNumBegin, std::size_t scanNumEnd) const override | pappso::TimsFrame | virtual
cumulateScansIntensities(std::size_t scanNumBegin, std::size_t scanNumEnd) const override | pappso::TimsFrame | virtual
cumulateScansToTrace(std::size_t scanNumBegin, std::size_t scanNumEnd) const override | pappso::TimsFrame | virtual
cumulateScansToTraceMzDownResolution(std::size_t mzindex_merge_window, std::size_t scanNumBegin, std::size_t scanNumEnd, quint32 &minimum_index, quint32 &maximum_index) const override | pappso::TimsFrame | virtual
cumulateScansToTraceMzDownResolution2(std::size_t mz_index_merge_window, double mz_range_begin, double mz_range_end, std::size_t mobility_scan_begin, std::size_t mobility_scan_end, quint32 &mz_minimum_index_out, quint32 &mz_maximum_index_out) const | pappso::TimsFrame |
cumulateSingleScanIntensities(std::size_t scanNum) const override | pappso::TimsFrame | virtual
downsizeMzRawMap(std::size_t mzindex_merge_window, std::map< quint32, quint32 > &rawSpectrum) const | pappso::TimsFrameBase |
extractTimsXicListInRtRange(std::vector< XicCoordTims * >::iterator &itXicListbegin, std::vector< XicCoordTims * >::iterator &itXicListend, XicExtractMethod method) const | pappso::TimsFrame | protected
getDriftTime(std::size_t scanNum) const | pappso::TimsFrameBase |
getId() const | pappso::TimsFrameBase |
getIonMobilityTraceByMzIndexRange(std::size_t mz_index_lower_bound, std::size_t mz_index_upper_bound, XicExtractMethod method) const | pappso::TimsFrameBase | virtual
getMassSpectrumCstSPtr(std::size_t scanNum) const | pappso::TimsFrame | virtual
getMassSpectrumSPtr(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual
getMaximumRawMassIndex() const | pappso::TimsFrameBase | virtual
getMsLevel() const | pappso::TimsFrameBase |
getMzCalibrationInterfaceSPtr() const final | pappso::TimsFrameBase | virtual
getNbrPeaks(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual
getOneOverK0Transformation(std::size_t scanNum) const | pappso::TimsFrameBase |
getRawTraceSPtr(std::size_t scanNum) const override | pappso::TimsFrameType1 | protected virtual
getScanIndexList(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual
getScanIntensities(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual
getScanNumFromOneOverK0(double one_over_k0) const | pappso::TimsFrameBase |
getScanOffset(std::size_t scanNum) const | pappso::TimsFrame | private
getTime() const | pappso::TimsFrameBase |
getTotalNumberOfScans() const | pappso::TimsFrameBase | virtual
getTraceFromCumulatedScans(std::map< quint32, quint32 > &accumulated_scans) const | pappso::TimsFrameBase |
getTraceFromCumulatedScansBuiltinCentroid(std::map< quint32, quint32 > &accumulated_scans) const | pappso::TimsFrameBase |
getVoltageTransformation(std::size_t scanNum) const | pappso::TimsFrameBase |
hasSameCalibrationData(const TimsFrameBase &other) const | pappso::TimsFrameBase | virtual
lzfDecompressScan(const char *src, unsigned int src_len, char *dest, unsigned int dest_len) | pappso::TimsFrameType1 | private
m_accumulationTime | pappso::TimsFrameBase | protected
m_msMsType | pappso::TimsFrameBase | protected
m_scanNumber | pappso::TimsFrameBase | protected
m_scanOffsetList | pappso::TimsFrameType1 | private
m_scanSizeList | pappso::TimsFrameType1 | private
m_time | pappso::TimsFrameBase | protected
m_timsC6 | pappso::TimsFrameBase | protected
m_timsC7 | pappso::TimsFrameBase | protected
m_timsDataFrame | pappso::TimsFrame | protected
m_timsDvStart | pappso::TimsFrameBase | protected
m_timsId | pappso::TimsFrameBase | protected
m_timsNdelay | pappso::TimsFrameBase | protected
m_timsSlope | pappso::TimsFrameBase | protected
m_timsTtrans | pappso::TimsFrameBase | protected
m_timsVmax | pappso::TimsFrameBase | protected
m_timsVmin | pappso::TimsFrameBase | protected
msp_mzCalibration | pappso::TimsFrameBase | protected
setAccumulationTime(double accumulation_time_ms) | pappso::TimsFrameBase |
setMsMsType(quint8 type) | pappso::TimsFrameBase |
setMzCalibration(double T1_frame, double T2_frame, double digitizerTimebase, double digitizerDelay, double C0, double C1, double C2, double C3, double C4, double T1_ref, double T2_ref, double dC1, double dC2) | pappso::TimsFrameBase |
setMzCalibrationInterfaceSPtr(MzCalibrationInterfaceSPtr mzCalibration) | pappso::TimsFrameBase |
setTime(double time) | pappso::TimsFrameBase |
setTimsCalibration(int tims_model_type, double C0, double C1, double C2, double C3, double C4, double C5, double C6, double C7, double C8, double C9) | pappso::TimsFrameBase |
TimsDirectXicExtractor | pappso::TimsFrame | private
TimsFrame(std::size_t timsId, quint32 scanNum, char *p_bytes, std::size_t len) | pappso::TimsFrame |
TimsFrame(const TimsFrame &other) | pappso::TimsFrame |
TimsFrame(std::size_t timsId, quint32 scanNum) | pappso::TimsFrame | protected
TimsFrameBase(std::size_t timsId, quint32 scanNum) | pappso::TimsFrameBase |
TimsFrameBase(const TimsFrameBase &other) | pappso::TimsFrameBase |
TimsFrameType1(std::size_t timsId, quint32 scanNum, char *p_bytes, std::size_t len) | pappso::TimsFrameType1 |
TimsFrameType1(const TimsFrameType1 &other) | pappso::TimsFrameType1 |
unshufflePacket(const char *src) | pappso::TimsFrame | private
~TimsFrame() | pappso::TimsFrame | virtual
~TimsFrameBase() | pappso::TimsFrameBase | virtual
~TimsFrameType1() | pappso::TimsFrameType1 | virtual