mzcalibrationinterface.cpp
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/**
* \file pappsomspp/vendors/tims/mzcalibration/mzcalibrationinterface.cpp
* \date 11/11/2020
* \author Olivier Langella
* \brief handles different ways to compute m/z using calibration parameters
*/
/*******************************************************************************
* Copyright (c) 2020 Olivier Langella <Olivier.Langella@u-psud.fr>.
*
* This file is part of the PAPPSOms++ library.
*
* PAPPSOms++ is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* PAPPSOms++ is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
*
******************************************************************************/
#include "mzcalibrationinterface.h"
namespace pappso
{
MzCalibrationInterface::MzCalibrationInterface(double digitizerTimebase,
double digitizerDelay)
: m_digitizerTimebase(digitizerTimebase), m_digitizerDelay(digitizerDelay)
{
}
MzCalibrationInterface::~MzCalibrationInterface()
{
}
double
MzCalibrationInterface::getTofFromTofIndex(double index) const
{
// mz calibration
return (index * m_digitizerTimebase) + m_digitizerDelay;
}
double
MzCalibrationInterface::getTofFromTofIndex(quint32 index) const
{
// mz calibration
return ((double)index * m_digitizerTimebase) + m_digitizerDelay;
}
} // namespace pappso
pappso::MzCalibrationInterface::getTofFromTofIndex
double getTofFromTofIndex(quint32 tof_index) const
get time of flight from raw index
Definition: mzcalibrationinterface.cpp:52
pappso::MzCalibrationInterface::MzCalibrationInterface
MzCalibrationInterface(double digitizerTimebase, double digitizerDelay)
Definition: mzcalibrationinterface.cpp:34
pappso::MzCalibrationInterface::~MzCalibrationInterface
virtual ~MzCalibrationInterface()
Definition: mzcalibrationinterface.cpp:40
pappso::MzCalibrationInterface::m_digitizerTimebase
double m_digitizerTimebase
Definition: mzcalibrationinterface.h:96
pappso::MzCalibrationInterface::m_digitizerDelay
double m_digitizerDelay
Definition: mzcalibrationinterface.h:97
mzcalibrationinterface.h
handles different ways to compute m/z using calibration parameters
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition: aa.cpp:39