Here is a list of all class members with links to the classes they belong to:

### - c -

- calculateDragDeltas() : pappso::BasePlotWidget
- calculateMassFromChemicalComponents() : pappso::AaModification
- charge : pappso::PrecursorIonData
- check() : pappso::GrpGroup , pappso::GrpMapPeptideToSubGroupSet
- checkScanNum() : pappso::TimsFrameBase
- checkXtandemVersion() : pappso::TandemWrapperRun
- chronoIntervalDebugString() : pappso::Utils
- chronoTimePointDebugString() : pappso::Utils
- clear() : pappso::GrpMapPeptideToGroup , pappso::MsRunSlice , pappso::QCPXic , pappso::XicWidget
- clearData() : pappso::MassSpectrumWidget , pappso::QCPSpectrum
- clearGraphData() : pappso::BaseTracePlotWidget
- clearTerm() : pappso::OboPsiModTerm
- clearXicPeakBorders() : pappso::QCPXic , pappso::XicWidget
- clicked() : pappso::XicWidget
- clone() : pappso::ExceptionInterrupted , pappso::ExceptionNotFound , pappso::ExceptionNotImplemented , pappso::ExceptionNotPossible , pappso::ExceptionNotRecognized , pappso::ExceptionOutOfRange , pappso::PappsoException , pappso::XtandemError
- cloneElement() : pappso::XmlStreamReaderInterface
- cloneMassSpectrumSPtr() : pappso::QualifiedMassSpectrum
- cloneNode() : pappso::XmlStreamReaderInterface
- cloneStartElement() : pappso::XmlStreamReaderInterface
- close() : pappso::FastaFileIndexer , pappso::FastaFileIndexerInterface , pappso::MgfOutput , pappso::MzxmlOutput
- ClusterApices : pappso::FilterLowIntensitySignalRemoval
- collisionEnergy : pappso::TimsData::SpectrumDescr
- ColorMapPlotConfig() : pappso::ColorMapPlotConfig
- combine() : pappso::MassDataCombinerInterface , pappso::MassSpectrumMinusCombiner , pappso::MassSpectrumPlusCombiner , pappso::TraceMinusCombiner , pappso::TracePlusCombiner
- computeBestChargeOfDataPoint() : pappso::FilterChargeDeconvolution
- computeIsotopeDeconvolution() : pappso::FilterChargeDeconvolution
- computeIsotopeMassList() : pappso::MassSpectrumWidget
- computeMinMaxCoordinates() : pappso::SelectionPolygon
- computeResolvingPower() : pappso::MassSpecTracePlotWidget
- ComputeRetentionTimeReference : pappso::MsRunRetentionTime< T >
- computeSeamarks() : pappso::MsRunRetentionTime< T >
- computeXtandemHyperscore() : pappso::XtandemHyperscoreBis
- const_iterator : pappso::GrpProtein , pappso::PeptideIsotopeSpectrumMatch , pappso::PeptideNaturalIsotopeList , pappso::PeptideSpectrumMatch
- contains() : pappso::GrpPeptideSet , pappso::GrpSubGroupSet , pappso::MzRange , pappso::PeptideSpectrumMatch , pappso::SelectionPolygon
- containsAll() : pappso::GrpPeptideSet
- ContainsAny() : ContainsAny
- containsAny() : pappso::GrpGroup , pappso::GrpPeptideSet
- containsRt() : pappso::TracePeak
- containsX() : pappso::Trace
- convertOrginalMsData2mzXmlData() : pappso::TandemWrapperRun
- convertTo1D() : pappso::SelectionPolygon
- convlv() : pappso::FilterSavitzkyGolay
- convolveWithNr : pappso::SavGolParams
- copyAndLzfDecompress() : pappso::TimsFrameType1
- copyPoint() : pappso::SelectionPolygon
- correctNewTimeValues() : pappso::MsRunRetentionTime< T >
- count() : pappso::UiMonitorInterface , pappso::UiMonitorText , pappso::UiMonitorTextPercent , pappso::UiMonitorVoid
- countModificationOnAa() : pappso::Peptide
- countPlus() : pappso::GrpProtein
- countTotalMatchedIons() : pappso::PeptideSpectrumMatch
- createAllAncillaryItems() : pappso::BasePlotWidget
- createArbitraryBins() : pappso::MzIntegrationParams
- createBins() : pappso::MzIntegrationParams
- createDataBasedBins() : pappso::MzIntegrationParams
- createInstance() : pappso::AaModification
- createInstanceMutation() : pappso::AaModification
- cumulateScan() : pappso::TimsFrame , pappso::TimsFrameType1
- cumulateScansInRawMap() : pappso::TimsFrame , pappso::TimsFrameBase
- cumulateScanToTrace() : pappso::TimsFrame , pappso::TimsFrameBase