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pappso::masschroq::Peptide Member List

This is the complete list of members for pappso::masschroq::Peptide, including all inherited members.

addAlignedPeakMeasurement(const PeptideMeasurements::Measurement &one_xic_measure, const pappso::MsRunRetentionTime< QString > &msrun_retention_time) | pappso::masschroq::Peptide |
addAlignedPeptideObservation(const PeptideObservation &peptide_observation, const pappso::MsRunRetentionTime< QString > &msrun_retention_time) | pappso::masschroq::Peptide |
addMsRunXicCoordCharge(const MsRunXicCoordCharge &msrun_xic_coord) | pappso::masschroq::Peptide |
addObservedChargeState(std::uint8_t charge) | pappso::masschroq::Peptide |
addObservedInMsRunSp(const MsRunSp &msrun_sp) | pappso::masschroq::Peptide |
computeConsensusRetentionTime() | pappso::masschroq::Peptide |
computeIsotopologues(double ni_min_abundance) override | pappso::masschroq::Peptide | virtual
getAllObservedChargeStateList() const | pappso::masschroq::Peptide |
getBestIonMobilityXicCoordToExtractOverallMsRunGroup(const MsRunGroup &msrun_group, const pappso::MsRunId &targeted_msrun, std::uint8_t charge) const | pappso::masschroq::Peptide |
getBestXicCoordSPtrForChargeInMsRunGroup(const MsRunGroup *msrun_group_p, std::uint8_t charge) const | pappso::masschroq::Peptide |
getConsensusMs2RetentionTime() const | pappso::masschroq::Peptide |
getConsensusPeakRetentionTime() const | pappso::masschroq::Peptide |
getId() const | pappso::masschroq::Peptide |
getMods() const | pappso::masschroq::Peptide |
getPappsoPeptideSp() const | pappso::masschroq::PeptideBase | virtual
getPeptideLabelMap() const | pappso::masschroq::Peptide |
getPeptideLabelPtr(const QString &label) const | pappso::masschroq::Peptide |
getPeptideNaturalIsotopeAverageSpList(pappso::PrecisionPtr precision, std::uint8_t charge, double ni_min_abundance) | pappso::masschroq::PeptideBase | virtual
getPeptideNaturalIsotopeList() const | pappso::masschroq::PeptideBase | virtual
getProteinSpList() const | pappso::masschroq::Peptide |
isObservedInMsRunSp(const MsRun *msrun_p) | pappso::masschroq::Peptide |
m_alignedPeakPositionElementList | pappso::masschroq::Peptide | private
m_allObservedChargeStateList | pappso::masschroq::Peptide | private
m_consensusAlignedMs2RetentionTime | pappso::masschroq::Peptide | private
m_consensusAlignedPeakRetentionTime | pappso::masschroq::Peptide | private
m_id | pappso::masschroq::Peptide | private
m_mods | pappso::masschroq::Peptide | private
m_msRunXicCoordChargeList | pappso::masschroq::Peptide | private
m_mutex | pappso::masschroq::PeptideBase | protected
m_niMinAbundance | pappso::masschroq::PeptideBase | protected
m_observedInMsRunSpList | pappso::masschroq::Peptide | private
m_peptideLabelMap | pappso::masschroq::Peptide | private
m_peptideNaturalIsotopeAverageSpListByCharge | pappso::masschroq::PeptideBase | protected
m_proteinSpList | pappso::masschroq::Peptide | private
m_referenceMs2ObservationList | pappso::masschroq::Peptide | private
mp_referenceMsRunRetentionTime | pappso::masschroq::Peptide | private
mpa_peptideNaturalIsotopeList | pappso::masschroq::PeptideBase | protected
msp_peptide | pappso::masschroq::PeptideBase | protected
Peptide(const QString &id, const pappso::PeptideSp &peptide_sp, const std::vector< ProteinSp > &protein_list) | pappso::masschroq::Peptide |
Peptide(const Peptide &other) | pappso::masschroq::Peptide |
PeptideBase(const pappso::PeptideSp &peptide_sp) | pappso::masschroq::PeptideBase |
populateIonMobilityGrid(pappso::IonMobilityGrid *ion_mobility_grid_p) const | pappso::masschroq::Peptide |
setJsonLabelList(const QJsonObject &json_label_list) | pappso::masschroq::Peptide |
setMods(const QString &mods) | pappso::masschroq::Peptide |
setReferenceMsRunRetentionTimePtr(const pappso::MsRunRetentionTime< QString > *msrun_retention_time_reference_p) | pappso::masschroq::Peptide |
~Peptide() | pappso::masschroq::Peptide | virtual
~PeptideBase() | pappso::masschroq::PeptideBase | virtual