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obolistproxymodel.cpp
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/**
* \file pappsomspp/widget/obo/obolistwidget/obolistproxymodel.cpp
* \date 19/04/2021
* \author Olivier Langella
* \brief MVC proxy model of OBO term list
*/
/*******************************************************************************
* Copyright (c) 2021 Olivier Langella
*<Olivier.Langella@universite-paris-saclay.fr>.
*
* This file is part of the PAPPSOms++ library.
*
* PAPPSOms++ is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* PAPPSOms++ is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
*
******************************************************************************/
#include "obolistproxymodel.h"
#include "../../../core/obo/obopsimod.h"
#include "../../../core/mzrange.h"
#include <QDebug>
using namespace pappso;
OboListProxyModel::OboListProxyModel(OboListModel *source_model, QObject *parent)
: QSortFilterProxyModel(parent)
{
setFilterRole(Qt::DisplayRole);
mp_sourceModel = source_model;
}
OboListProxyModel::~OboListProxyModel()
{
}
bool
pappso::OboListProxyModel::lessThan(const QModelIndex &source_left,
const QModelIndex &source_right) const
{
// qDebug();
QVariant leftData = sourceModel()->data(source_left, Qt::UserRole);
QVariant rightData = sourceModel()->data(source_right, Qt::UserRole);
return leftData.value<OboPsiModTerm>().m_diffMono < rightData.value<OboPsiModTerm>().m_diffMono;
}
void
pappso::OboListProxyModel::filterMzPrecision(double target_mz, pappso::PrecisionPtr precision)
{
m_precisionPtr = precision;
m_mzTarget = target_mz;
invalidateFilter();
}
bool
pappso::OboListProxyModel::filterAcceptsRow(int source_row,
const QModelIndex &source_parent [[maybe_unused]]) const
{
// qDebug();
if(m_precisionPtr != nullptr)
{
MzRange range(m_mzTarget, m_precisionPtr);
OboPsiModTerm term = mp_sourceModel->getOboPsiModTerm(source_row);
/*
qDebug() << source_row << " " << source_parent.row() << " "
<< range.toString() << " " << term.m_diffMono << " "
<< term.m_accession;
*/
if(range.contains(term.m_diffMono))
{
// qDebug();
}
else
{
// qDebug() << "false";
return false;
}
}
return true;
}
pappso::MzRange
Definition mzrange.h:46
pappso::MzRange::contains
bool contains(pappso_double) const
Definition mzrange.cpp:115
pappso::OboListModel
Definition obolistmodel.h:46
pappso::OboListModel::data
QVariant data(const QModelIndex &index, int role=Qt::DisplayRole) const override
Definition obolistmodel.cpp:89
pappso::OboListProxyModel::m_mzTarget
double m_mzTarget
Definition obolistproxymodel.h:65
pappso::OboListProxyModel::~OboListProxyModel
~OboListProxyModel()
Definition obolistproxymodel.cpp:44
pappso::OboListProxyModel::OboListProxyModel
OboListProxyModel(OboListModel *source_model, QObject *parent=nullptr)
Definition obolistproxymodel.cpp:37
pappso::OboListProxyModel::m_precisionPtr
PrecisionPtr m_precisionPtr
Definition obolistproxymodel.h:64
pappso::OboListProxyModel::mp_sourceModel
OboListModel * mp_sourceModel
Definition obolistproxymodel.h:66
pappso::OboListProxyModel::lessThan
bool lessThan(const QModelIndex &source_left, const QModelIndex &source_right) const override
Definition obolistproxymodel.cpp:49
pappso::OboListProxyModel::filterAcceptsRow
bool filterAcceptsRow(int source_row, const QModelIndex &source_parent) const override
Definition obolistproxymodel.cpp:69
pappso::OboListProxyModel::filterMzPrecision
void filterMzPrecision(double target_mz, PrecisionPtr precision)
Definition obolistproxymodel.cpp:61
pappso::OboPsiModTerm
Definition obopsimodterm.h:34
pappso::OboPsiModTerm::m_diffMono
double m_diffMono
Definition obopsimodterm.h:66
mzrange.h
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39
pappso::PrecisionPtr
const PrecisionBase * PrecisionPtr
Definition precision.h:122
obolistproxymodel.h
obopsimod.h