Loading...
Searching...
No Matches
pappso::cbor::psm::PsmFileAppend Member List

This is the complete list of members for pappso::cbor::psm::PsmFileAppend, including all inherited members.

CborStreamReaderInterface() | pappso::cbor::CborStreamReaderInterface |
close() override | pappso::cbor::psm::PsmFileAppend | virtual
currentProteinRefListContainsDecoy() const | pappso::cbor::psm::PsmFileReaderBase | protected
currentProteinRefListContainsTarget() const | pappso::cbor::psm::PsmFileReaderBase | protected
fastaFilesReady(pappso::UiMonitorInterface &monitor) override | pappso::cbor::psm::PsmFileAppend | virtual
getCurrentPsmPeptideSp() const | pappso::cbor::psm::PsmFileReaderBase | protected
getCurrentQualifiedMassSpectrumSPtr() const | pappso::cbor::psm::PsmFileReaderBase | protected
getExpectedString() | pappso::cbor::CborStreamReaderInterface | protected
getPrecursorMass(double mz_prec, uint charge) const | pappso::cbor::psm::PsmFileReaderBase | protected
informationsReady(pappso::UiMonitorInterface &monitor) override | pappso::cbor::psm::PsmFileAppend | virtual
initCborReader(QFile *pcborfile) | pappso::cbor::CborStreamReaderInterface | protected
initCborReader(QIODevice *pcborfile) | pappso::cbor::CborStreamReaderInterface | protected
logReady(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
m_cborInformations | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborLog | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborParameterMap | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanId | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanMs2 | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanPrecursor | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanProps | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanPsmEval | pappso::cbor::psm::PsmFileReaderBase | protected
m_cborScanPsmProps | pappso::cbor::psm::PsmFileReaderBase | protected
m_currentIdentificationFileList | pappso::cbor::psm::PsmFileReaderBase | protected
m_currentPeaklistFile | pappso::cbor::psm::PsmFileReaderBase | protected
m_currentPsmProforma | pappso::cbor::psm::PsmFileReaderBase | protected
m_currentPsmProteinRefList | pappso::cbor::psm::PsmFileReaderBase | protected
m_currentSampleName | pappso::cbor::psm::PsmFileReaderBase | protected
m_data | pappso::cbor::CborStreamReaderInterface | protected
m_decoyFastaFiles | pappso::cbor::psm::PsmFileReaderBase | protected
m_expectedString | pappso::cbor::CborStreamReaderInterface | protected
m_isInformations | pappso::cbor::psm::PsmFileAppend | private
m_outputDecoyFastaFiles | pappso::cbor::psm::PsmFileAppend | private
m_outputParameterMap | pappso::cbor::psm::PsmFileAppend | private
m_outputTargetFastaFiles | pappso::cbor::psm::PsmFileAppend | private
m_proteinMap | pappso::cbor::psm::PsmFileReaderBase | protected
m_sampleStorageList | pappso::cbor::psm::PsmFileAppend | private
m_targetFastaFiles | pappso::cbor::psm::PsmFileReaderBase | protected
mergeParameterMap() | pappso::cbor::psm::PsmFileAppend | protected
mp_output | pappso::cbor::psm::PsmFileAppend | private
mpa_cborReader | pappso::cbor::CborStreamReaderInterface | protected
mpa_temporaryDirectory | pappso::cbor::psm::PsmFileAppend | private
parameterMapReady(pappso::UiMonitorInterface &monitor) override | pappso::cbor::psm::PsmFileAppend | virtual
proteinMapReady(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
PsmFileAppend(pappso::cbor::CborStreamWriter *p_output) | pappso::cbor::psm::PsmFileAppend |
PsmFileReaderBase() | pappso::cbor::psm::PsmFileReaderBase |
psmReady(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readCbor(QFile *cborp, pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase |
readCbor(QIODevice *cborp, pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase |
readInformations(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readLog(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readParameterMap(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readProteinMap(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readPsm(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
readPsmFile(bool &is_ok) | pappso::cbor::psm::PsmFileReaderBase | protected
readPsmProteinRef(bool &is_ok) | pappso::cbor::psm::PsmFileReaderBase | protected
readRoot(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected
readSample(pappso::UiMonitorInterface &monitor) override | pappso::cbor::psm::PsmFileAppend | virtual
readScan(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
sampleFinished(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
sampleListFinished(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
sampleListStarted(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
sampleStarted(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
scanFinished(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
scanStarted(pappso::UiMonitorInterface &monitor) | pappso::cbor::psm::PsmFileReaderBase | protected virtual
writePsmFile(CborStreamWriter &writer, const PsmFile &psm_file) | pappso::cbor::psm::PsmFileReaderBase | protected
writePsmFileList(CborStreamWriter &writer, const std::vector< PsmFile > &file_list) | pappso::cbor::psm::PsmFileReaderBase | protected
~CborStreamReaderInterface() | pappso::cbor::CborStreamReaderInterface | virtual
~PsmFileAppend() | pappso::cbor::psm::PsmFileAppend | virtual
~PsmFileReaderBase() override | pappso::cbor::psm::PsmFileReaderBase | virtual