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trace.cpp File Reference
`#include <numeric>`
`#include <limits>`
`#include <qjsonarray.h>`
`#include <qnamespace.h>`
`#include <vector>`
`#include <map>`
`#include <cmath>`
`#include <algorithm>`
`#include <QDebug>`
`#include <QObject>`
`#include "pappsomspp/core/utils.h"`
`#include "trace.h"`
`#include "maptrace.h"`
`#include "pappsomspp/core/types.h"`
`#include "pappsomspp/core/pappsoexception.h"`
`#include "pappsomspp/core/exception/exceptionoutofrange.h"`
`#include "pappsomspp/core/exception/exceptionnotpossible.h"`

Go to the source code of this file.

## Namespaces

namespace | pappso
| tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge

## Functions

PMSPP_LIB_DECL QDataStream & | pappso::operator<< (QDataStream &out, const Trace &trace)
PMSPP_LIB_DECL QDataStream & | pappso::operator>> (QDataStream &out, Trace &trace)
std::vector< DataPoint >::iterator | pappso::findFirstEqualOrGreaterX (std::vector< DataPoint >::iterator begin, std::vector< DataPoint >::iterator end, const double &value)
| find the first element in which X is equal or greater than the value searched important : it implies that Trace is sorted by X
std::vector< DataPoint >::const_iterator | pappso::findFirstEqualOrGreaterX (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, const double &value)
std::vector< DataPoint >::iterator | pappso::findFirstGreaterX (std::vector< DataPoint >::iterator begin, std::vector< DataPoint >::iterator end, const double &value)
| find the first element in which X is greater than the value searched important : it implies that Trace is sorted by X
std::vector< DataPoint >::const_iterator | pappso::findFirstGreaterX (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, const double &value)
std::vector< DataPoint >::iterator | pappso::findDifferentYvalue (std::vector< DataPoint >::iterator begin, std::vector< DataPoint >::iterator end, const double &y_value)
| find the first element in which Y is different of value
std::vector< DataPoint >::const_iterator | pappso::findDifferentYvalue (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, const double &y_value)
std::vector< DataPoint >::const_iterator | pappso::minYDataPoint (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end)
std::vector< DataPoint >::iterator | pappso::minYDataPoint (std::vector< DataPoint >::iterator begin, std::vector< DataPoint >::iterator end)
| find the element with the smallest Y value (intensity)
std::vector< DataPoint >::const_iterator | pappso::maxYDataPoint (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end)
std::vector< DataPoint >::iterator | pappso::maxYDataPoint (std::vector< DataPoint >::iterator begin, std::vector< DataPoint >::iterator end)
| find the element with the greatest Y value (intensity)
std::vector< DataPoint >::const_iterator | pappso::moveLowerYRigthDataPoint (const Trace &trace, std::vector< DataPoint >::const_iterator begin)
| Move right to the lower value.
std::vector< DataPoint >::const_iterator | pappso::moveLowerYLeftDataPoint (const Trace &trace, std::vector< DataPoint >::const_iterator begin)
| Move left to the lower value.
double | pappso::sumYTrace (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, double init)
| calculate the sum of y value of a trace
double | pappso::meanYTrace (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end)
| calculate the mean of y value of a trace
double | pappso::quantileYTrace (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, double quantile)
| calculate the quantile of y value of a trace
double | pappso::medianYTrace (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end)
| calculate the median of y value of a trace
double | pappso::areaTrace (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end)
| calculate the area of a trace
Trace | pappso::flooredLocalMaxima (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, double y_floor)
Trace | pappso::incrementByValueX (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, double increment)
Trace | pappso::incrementByValueY (std::vector< DataPoint >::const_iterator begin, std::vector< DataPoint >::const_iterator end, double increment)

## Variables

int | traceMetaTypeId = qRegisterMetaType<pappso::Trace>("pappso::Trace")
int | tracePtrMetaTypeId = qRegisterMetaType<pappso::Trace *>("pappso::Trace *")

## Variable Documentation

## traceMetaTypeId

int traceMetaTypeId = qRegisterMetaType<pappso::Trace>("pappso::Trace")

Definition at line 22 of file trace.cpp.

Referenced by Q_DECLARE_METATYPE().

## tracePtrMetaTypeId

int tracePtrMetaTypeId = qRegisterMetaType<pappso::Trace *>("pappso::Trace *")

Definition at line 23 of file trace.cpp.

Referenced by Q_DECLARE_METATYPE().