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Member cubic_solver (InHousePolynomialSolverResult &res, double a1, double b, double c, double d)
  Cardaono cubic solver
Namespace pappso

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Class pappso::cbor::mzcbor::ConvertToMzml
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Struct pappso::cbor::mzcbor::CvParam
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Struct pappso::cbor::mzcbor::CvParamMap
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Class pappso::cbor::mzcbor::MzcborBuildIndexReader
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Class pappso::cbor::mzcbor::MzcborIndexReader
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Class pappso::cbor::mzcbor::MzcborSpectrumCollectionReader
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Class pappso::cbor::mzcbor::MzmlConvert
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Struct pappso::cbor::mzcbor::Precursor
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Struct pappso::cbor::mzcbor::Scan
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Struct pappso::cbor::mzcbor::Spectrum
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Class pappso::cbor::psm::CborScanMapBase
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Class pappso::cbor::psm::MzIdentMlReader
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Class pappso::cbor::psm::PsmCbor2Json
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Class pappso::cbor::psm::PsmFeatures
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Class pappso::cbor::psm::PsmFeaturesScan
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Class pappso::cbor::psm::PsmFileAppend
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Class pappso::cbor::psm::PsmFileReaderBase
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Class pappso::cbor::psm::PsmNewEval
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Class pappso::cbor::psm::PsmSpecGlob
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Class pappso::cbor::psm::PsmSpecGlobScan
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Class pappso::cbor::psm::PsmSpecPeptidOms
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Class pappso::cbor::psm::SageFileReader
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Class pappso::cbor::psm::SageReader
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Class pappso::cbor::psm::SageTsvHandler
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Class pappso::CosineSimilarity
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Class pappso::FilterSuiteString
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Class pappso::FilterTriangle
  sum peaks under a triangle base
Class pappso::IonMobilityGrid
  helper to align ion mobility ranges between MS runs
Class pappso::masschroq::AlignmentMethod
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Class pappso::masschroq::CborOutputStream
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Class pappso::masschroq::JsonInput
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Class pappso::masschroq::MbrPeptideMeasurements
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Class pappso::masschroq::MsRunGroup
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Class pappso::masschroq::PeptideBase
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Class pappso::masschroq::PeptideLabel
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Class pappso::masschroq::PeptideMeasurementsBase
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Class pappso::masschroq::PeptideObservation
  group together one Peptide and observations on this peptide
Class pappso::masschroq::PrecursorParser
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Class pappso::masschroq::Protein
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Class pappso::masschroq::QuantificationMethod
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Class pappso::masschroq::Utils
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Class pappso::MgfOutput
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Class pappso::MzCalibrationInterface
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Member pappso::MzCalibrationInterface::operator== (const MzCalibrationInterface &other) const
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Class pappso::MzCalibrationModel1
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Class pappso::MzCalibrationStore
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Member pappso::MzCalibrationStore::MzCalibrationStore ()
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Member pappso::MzCalibrationStore::~MzCalibrationStore ()
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Class pappso::MzcborMsFileReader
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Class pappso::MzcborMsRunReader
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Class pappso::MzIdentMlWriter
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Class pappso::MzxmlOutput
  use msrunreader as input and writes all peaks into an mzXML output stream
Class pappso::OboListModel
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Class pappso::OboListProxyModel
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Member pappso::Peptide::setGlobalModification (Enums::Isotope isotope_kind)
Class pappso::PeptideProFormaParser
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Class pappso::ProjectParameters
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Class pappso::PsmFeatures
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Class pappso::specglob::ExperimentalSpectrum
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Class pappso::specglob::PeptideModel
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Class pappso::specglob::PeptideSpectrum
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Class pappso::specglob::PostTreatment
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Class pappso::specglob::ScoreValues
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Class pappso::specglob::SpectralAlignment
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Class pappso::specself::SelfSpectrum
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Class pappso::spectree::SpecTree
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Class pappso::TimsBinDec
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Class pappso::TimsData
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Class pappso::TimsDdaPrecursors
  TimsData helper that stores all related DDA informations
Member pappso::TimsDdaPrecursors::getClosestPrecursorIdByMz (std::vector< std::vector< double > > ids, double mz_value)
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Class pappso::TimsDiaSlices
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Class pappso::TimsDirectXicExtractor
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Class pappso::TimsFrame
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Class pappso::TimsFrameBase
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Class pappso::TimsFrameMobilityTraces
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Class pappso::TimsFrameRawDataChunck
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Member pappso::TimsFramesMsRunReader::TimsFramesMsRunReader (MsRunIdCstSPtr &msrun_id_csp)
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Class pappso::TimsFrameType1
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Class pappso::TimsMs2CentroidFilter
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Class pappso::TimsMsFileReader
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Member pappso::TimsMsRunReader::TimsMsRunReader (MsRunIdCstSPtr &msrun_id_csp)
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Member pappso::TimsMsRunReaderMs2::TimsMsRunReaderMs2 (MsRunIdCstSPtr &msrun_id_csp)
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Member pappso::TimsMsRunReaderMs2Selected::TimsMsRunReaderMs2Selected (MsRunIdCstSPtr &msrun_id_csp)
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Class pappso::TimsXicExtractorInterface
  set of minimum functions to build XICs using Tims data
Class pappso::TracePeakList
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Class pappso::UiMonitorInterface
  pure virtual user interface class to monitor any long process it contains :
  - title, status, progress messages
  - callback functions to interrupt long process it does not contains any error messages functions : use pappso::ExceptionInterrupted to handle this
Class pappso::UiMonitorText
  simple text monitor using text stream
Class pappso::UiMonitorTextPercent
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Class pappso::UiMonitorVoid
  nothing monitor to save CPU and memory if needed
Class pappso::WrapTandemInput
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Class pappso::WrapTandemResults
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