Loading...
Searching...
No Matches
Here is a list of all class members with links to the classes they belong to:

### - i -

- id : pappso::cbor::mzcbor::Spectrum, pappso::cbor::psm::MzIdentMlReader::SpectrumIdentificationResult
- IdentificationEngine : pappso::cbor::psm::MzIdentMlReader
- includes() : pappso::GrpSubGroup
- incrementX() : pappso::DataPoint, pappso::DataPointJs
- incrementY() : pappso::DataPoint, pappso::DataPointJs
- index : pappso::cbor::mzcbor::Spectrum
- index_not_defined : pappso::spectree::SpecTree
- indexNodeMapSize() : pappso::MsRunDataSetTree
- indice : pappso::specglob::ExperimentalSpectrumDataPoint
- informationsReady() : pappso::cbor::psm::PsmCbor2Json, pappso::cbor::psm::PsmFileAppend, pappso::cbor::psm::PsmFileReaderBase, pappso::cbor::psm::PsmFileScanProcessAndCopy
- initCborReader() : pappso::cbor::CborStreamReaderInterface
- initFastAlign() : pappso::specpeptidoms::SemiGlobalAlignment
- InitializationResult : pappso::MzIntegrationParams
- initialize() : pappso::BafAsciiFileReader, pappso::BafAsciiMsRunReader, pappso::BasePlotContext, pappso::DataPoint, pappso::DataPointJs, pappso::LocalSignalToNoiseEstimator, pappso::MapTrace, pappso::MassSpecTracePlotContext, pappso::MsRunReader, pappso::MzcborMsFileReader, pappso::MzcborMsRunReader, pappso::MzIntegrationParams, pappso::PwizMsFileReader, pappso::PwizMsRunReader, pappso::SavGolParams, pappso::TimsMsFileReader, pappso::TimsMsRunReaderBase, pappso::TimsMsRunReaderDia, pappso::TimsMsRunReaderMs2, pappso::TimsMsRunReaderMs2Selected, pappso::Trace, pappso::TraceJs, pappso::XyMsFileReader, pappso::XyMsRunReader
- initializeAndClone() : pappso::XicCoord, pappso::XicCoordTims
- initpreciseAlign() : pappso::specpeptidoms::SemiGlobalAlignment
- insert() : pappso::cbor::psm::PsmProteinMap
- insertOrUpdate() : pappso::MapTrace
- insideElement() : pappso::cbor::mzcbor::MzmlConvert
- integrationRequestedSignal() : pappso::BasePlotWidget
- IntegrationScope() : pappso::IntegrationScope
- IntegrationScopeBase() : pappso::IntegrationScopeBase
- IntegrationScopeRect() : pappso::IntegrationScopeRect
- IntegrationScopeRhomb() : pappso::IntegrationScopeRhomb
- IntegrationScopeSpec() : pappso::IntegrationScopeSpec
- integrationScopeSPtr : pappso::IntegrationScopeSpec
- intensity : pappso::masschroq::Peptide::AlignedPeakPositionElement, pappso::masschroq::Peptide::MsRunXicCoordCharge, pappso::MsRunRetentionTimeSeamarkPoint< T >, pappso::PrecursorIonData
- intensity_index : pappso::TimsFrameBase::TofIndexIntensityPair
- IntensityThresholdCalculation : pappso::LocalSignalToNoiseEstimator
- INTRA_CLUSTER_INTER_PEAK_DISTANCE : pappso::FilterLowIntensitySignalRemoval
- Ion() : pappso::Ion
- ion_charge : pappso::SimplePeakIonMatch
- ion_mobility : pappso::cbor::psm::SageTsvHandler::Line
- ion_mz : pappso::SimplePeakIonMatch
- ion_size : pappso::SimplePeakIonMatch
- ion_type : pappso::SimplePeakIonMatch
- ionChanged() : pappso::MassSpectrumWidget
- ionDeltatMzMassMap : pappso::PeptideRawFragmentMasses
- IonIsotopeRatioScore() : pappso::IonIsotopeRatioScore
- ionizationMode : pappso::MassSpectrumLineData
- IonList : pappso::PeptideFragmentIonListBase
- IonMobilityGrid() : pappso::IonMobilityGrid
- ionSourceType : pappso::MassSpectrumLineData
- is1D() : pappso::IntegrationScope, pappso::IntegrationScopeBase, pappso::IntegrationScopeRect, pappso::IntegrationScopeRhomb, pappso::SelectionPolygon
- is2D() : pappso::IntegrationScope, pappso::IntegrationScopeBase, pappso::IntegrationScopeRect, pappso::IntegrationScopeRhomb, pappso::SelectionPolygon
- is_decoy : pappso::cbor::psm::MzIdentMlReader::MzidDBSequence
- isA() : pappso::OboPsiModTerm
- isAaEqual() : pappso::Aa
- isAligned() : pappso::MsRunRetentionTime< T >
- isClickOntoXAxis() : pappso::BasePlotWidget
- isClickOntoYAxis() : pappso::BasePlotWidget
- isContaminant : pappso::cbor::psm::PsmProtein
- isDdaRun() : pappso::TimsData
- isDecoy : pappso::cbor::psm::MzIdentMlReader::MzidPeptideEvidence
- isDiaRun() : pappso::TimsData
- isEmpty() : pappso::PeptideNaturalIsotopeAverage
- isEmptyMassSpectrum() : pappso::QualifiedMassSpectrum
- isInt : pappso::cbor::mzcbor::BinaryDataArray
- isIntensity() : pappso::cbor::mzcbor::BinaryDataArray
- isInternal() : pappso::AaModification
- isKeyBoardDragging : pappso::BasePlotContext
- isLeftPseudoButtonKeyPressed : pappso::BasePlotContext
- isLesser() : pappso::Aa
- isMonoThread() : pappso::MsRunReader
- isMouseDragging : pappso::BasePlotContext
- isMz() : pappso::cbor::mzcbor::BinaryDataArray
- isMzcbor() : pappso::cbor::mzcbor::MzcborReaderBase
- isMzcborIndex() : pappso::cbor::mzcbor::MzcborIndexReader
- isMzInRange() : pappso::TimsDiaSlices::MsMsWindow
- isOboTerm() : pappso::OboTermForm
- isOboTermSelected() : pappso::OboChooserWidget
- isObservedInMsRunSp() : pappso::masschroq::Peptide
- IsolationMz : pappso::TimsDiaSlices::MsMsWindow
- isolationMz : pappso::TimsDdaPrecursors::SpectrumDescr
- IsolationWidth : pappso::TimsDiaSlices::MsMsWindow
- isolationWidth : pappso::TimsDdaPrecursors::SpectrumDescr
- isolationWindow : pappso::cbor::mzcbor::Precursor
- isotope : pappso::IsotopeCount
- isotope_error : pappso::cbor::psm::SageTsvHandler::Line
- isPalindrome() : pappso::Peptide, pappso::PeptideFragment, pappso::PeptideFragmentIon, pappso::PeptideInterface, pappso::PeptideNaturalIsotope
- isReadAhead() : pappso::masschroq::PrecursorParser, pappso::SpectrumCollectionHandlerInterface
- isRectangle() : pappso::IntegrationScope, pappso::IntegrationScopeBase, pappso::IntegrationScopeRect, pappso::IntegrationScopeRhomb, pappso::SelectionPolygon
- isRemoveZeroValDataPoints() : pappso::MzIntegrationParams
- isRhomboid() : pappso::IntegrationScope, pappso::IntegrationScopeBase, pappso::IntegrationScopeRect, pappso::IntegrationScopeRhomb
- isRightPseudoButtonKeyPressed : pappso::BasePlotContext
- isSelectionRectangleVisible() : pappso::BasePlotWidget
- isSpectrumIndex : pappso::cbor::psm::MzIdentMlReader::SpectrumIdentificationResult
- isTarget : pappso::cbor::psm::PsmProtein
- isUnimod() : pappso::OboPsiModTerm
- isValid() : pappso::DataPoint, pappso::DataPointJs, pappso::MassSpectrumId, pappso::MsRunId, pappso::MzIntegrationParams, pappso::OboPsiModTerm
- isVerticalDisplacementAboveThreshold() : pappso::BasePlotWidget
- it_experimental_peak_match : pappso::specglob::TheoreticalPeakDataPoint
- ItemCart() : pappso::spectree::ItemCart
- Iterator : pappso::MassDataCombinerInterface
- ivector() : pappso::FilterSavitzkyGolay