Package: jmodeltest
Version: 2.1.10+dfsg-14
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2699
Depends: java-wrappers, phyml, alter-sequence-alignment, libmpj-java, libpal-java
Section: science
Priority: optional
Homepage: https://github.com//ddarriba/jmodeltest2
Description: HPC selection of models of nucleotide substitution
 jModelTest is a tool to carry out statistical selection of best-fit
 models of nucleotide substitution. It implements five different model
 selection strategies: hierarchical and dynamical likelihood ratio tests
 (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC),
 and a decision theory method (DT). It also provides estimates of model
 selection uncertainty, parameter importances and model-averaged
 parameter estimates, including model-averaged tree topologies.
 jModelTest 2 includes High Performance Computing (HPC) capabilities and
 additional features like new strategies for tree optimization, model-
 averaged phylogenetic trees (both topology and branch length), heuristic
 filtering and automatic logging of user activity.
