# Uses of Package
jebl.evolution.io

Packages that use jebl.evolution.io
Package
Description
jebl.evolution.align
Provides classes and interfaces for pairwise alignment of two sequences.
jebl.evolution.io
jebl.evolution.trees

Classes in jebl.evolution.io used by jebl.evolution.align
Class
Description
ImportException
Classes in jebl.evolution.io used by jebl.evolution.io
Class
Description
AlignmentExporter
AlignmentImporter
ByteBuilder
Similar to a StringBuilder, but its internal buffer is a byte[] with one entry for each character, so it can only correctly append single-byte characters.
DistanceMatrixImporter
DistanceMatrixImporter.Triangle
IllegalCharacterPolicy
What to do when an imported document contains illegal characters
ImmediateSequenceImporter
A sequence importer sending the sequences back one by one, which makes it possible to import larger documents if handled wisely on the other side.
ImmediateSequenceImporter.Callback
ImportException
NexusImporter.NexusBlock
Represents the block types used in the nexus format
SequenceExporter
SequenceImporter
Interface for importers that do sequences
TreeExporter
TreeImporter
Interface for importers that do trees
Classes in jebl.evolution.io used by jebl.evolution.trees
Class
Description
ImportException
NexusImporter
Class for importing NEXUS file format.