# Uses of Package
jebl.evolution.align.scores

Packages that use jebl.evolution.align.scores
Package
Description
jebl.evolution.align
Provides classes and interfaces for pairwise alignment of two sequences.
jebl.evolution.align.scores

Classes in jebl.evolution.align.scores used by jebl.evolution.align
Class
Description
Scores
Base class for all score matrices in the package.
Classes in jebl.evolution.align.scores used by jebl.evolution.align.scores
Class
Description
AminoAcidScores
Blosum45
Blosum50
Blosum55
Blosum60
Blosum62
Blosum65
Blosum70
Blosum75
Blosum80
Blosum85
Blosum90
NucleotideScores
Pam100
Pam110
Pam120
Pam130
Pam140
Pam150
Pam160
Pam170
Pam180
Pam190
Pam200
Pam210
Pam220
Pam230
Pam240
Pam250
ScoreMatrix
Scores
Base class for all score matrices in the package.