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IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > Member List

This is the complete list of members for IsoSpec::IsoOrderedGeneratorTemplate< MarginalType >, including all inherited members.

addElement(int atomCount, int noIsotopes, const double *isotopeMasses, const double *isotopeProbabilities) | IsoSpec::Iso |
advanceToNextConfiguration() override final | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > | virtual
allDim | IsoSpec::Iso | protected
atomCounts | IsoSpec::Iso | protected
confSize | IsoSpec::Iso | protected
dimNumber | IsoSpec::Iso | protected
doMarginalsNeedSorting() const (defined in IsoSpec::Iso) | IsoSpec::Iso | protected
FromFASTA(const char *fasta, bool use_nominal_masses=false, bool add_water=true) | IsoSpec::Iso | static
FromFASTA(const std::string &fasta, bool use_nominal_masses=false, bool add_water=true) | IsoSpec::Iso | inline static
get_conf_by_indexes(int *space) (defined in IsoSpec::IsoOrderedGeneratorTemplate< MarginalType >) | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > | inline
get_conf_signature(int *space) const override final | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > | inline virtual
getAllDim() const | IsoSpec::Iso | inline
getDimNumber() const | IsoSpec::Iso | inline
getHeaviestPeakMass() const | IsoSpec::Iso |
getLightestPeakMass() const | IsoSpec::Iso |
getModeLProb() const | IsoSpec::Iso |
getModeMass() const | IsoSpec::Iso |
getMonoisotopicPeakMass() const | IsoSpec::Iso |
getTheoreticalAverageMass() const | IsoSpec::Iso |
getUnlikeliestPeakLProb() const | IsoSpec::Iso |
Iso() (defined in IsoSpec::Iso) | IsoSpec::Iso |
Iso(int _dimNumber, const int *_isotopeNumbers, const int *_atomCounts, const double *_isotopeMasses, const double *_isotopeProbabilities) | IsoSpec::Iso |
Iso(int _dimNumber, const int *_isotopeNumbers, const int *_atomCounts, const double *const *_isotopeMasses, const double *const *_isotopeProbabilities) (defined in IsoSpec::Iso) | IsoSpec::Iso |
Iso(const char *formula, bool use_nominal_masses=false) | IsoSpec::Iso |
Iso(const std::string &formula, bool use_nominal_masses=false) | IsoSpec::Iso | inline
Iso(Iso &&other) | IsoSpec::Iso |
Iso(const Iso &other, bool fullcopy) | IsoSpec::Iso |
IsoGenerator(Iso &&iso, bool alloc_partials=true) | IsoSpec::IsoGenerator |
IsoOrderedGeneratorTemplate(const IsoOrderedGeneratorTemplate &other)=delete (defined in IsoSpec::IsoOrderedGeneratorTemplate< MarginalType >) | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > |
IsoOrderedGeneratorTemplate(Iso &&iso, int _tabSize=1000, int _hashSize=1000) | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > |
isotopeNumbers | IsoSpec::Iso | protected
lprob() const | IsoSpec::IsoGenerator | inline virtual
marginals | IsoSpec::Iso | protected
mass() const | IsoSpec::IsoGenerator | inline virtual
mode_lprob (defined in IsoSpec::IsoGenerator) | IsoSpec::IsoGenerator |
operator=(const IsoOrderedGeneratorTemplate &other)=delete (defined in IsoSpec::IsoOrderedGeneratorTemplate< MarginalType >) | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > |
operator=(const Iso &other)=delete (defined in IsoSpec::Iso) | IsoSpec::Iso |
partialLProbs | IsoSpec::IsoGenerator | protected
partialMasses | IsoSpec::IsoGenerator | protected
partialProbs | IsoSpec::IsoGenerator | protected
prob() const | IsoSpec::IsoGenerator | inline virtual
saveMarginalLogSizeEstimates(double *priorities, double target_total_prob) const | IsoSpec::Iso |
stddev() const | IsoSpec::Iso | inline
variance() const | IsoSpec::Iso |
~Iso() | IsoSpec::Iso | virtual
~IsoGenerator() | IsoSpec::IsoGenerator | virtual
~IsoOrderedGeneratorTemplate() | IsoSpec::IsoOrderedGeneratorTemplate< MarginalType > | virtual