# Serialized Form

## Package ij

### Class ij.ImageJ

class ImageJ extends Frame implements Serializable

#### Serialized Fields

##### actionPerformedTime

    long actionPerformedTime

##### applet

    Applet applet

##### classes

    Vector classes

##### embedded

    boolean embedded

##### exitWhenQuitting

    boolean exitWhenQuitting

##### firstTime

    boolean firstTime

##### hotkey

    boolean hotkey

##### keyPressedTime

    long keyPressedTime

##### lastKeyCommand

    String lastKeyCommand

##### progressBar

    ProgressBar progressBar

##### quitMacro

    boolean quitMacro

##### quitting

    boolean quitting

##### statusBar

    Panel statusBar

##### statusLine

    JLabel statusLine

##### toolbar

    Toolbar toolbar

##### windowClosed

    boolean windowClosed

### Class ij.ImageJApplet

class ImageJApplet extends Applet implements Serializable

## Package ij.gui

### Class ij.gui.Arrow

class Arrow extends Line implements Serializable

#### Serialized Fields

##### doubleHeaded

    boolean doubleHeaded

##### headShaftRatio

    double headShaftRatio

##### headSize

    double headSize

##### outline

    boolean outline

##### path

    GeneralPath path

##### points

    float[] points

##### style

    int style

### Class ij.gui.EllipseRoi

class EllipseRoi extends PolygonRoi implements Serializable

#### Serialized Fields

##### aspectRatio

    double aspectRatio

##### handle

    int[] handle

##### xstart

    double xstart

##### ystart

    double ystart

### Class ij.gui.FreehandRoi

class FreehandRoi extends PolygonRoi implements Serializable

### Class ij.gui.GenericDialog

class GenericDialog extends Dialog implements Serializable

#### Serialized Fields

##### addToSameRow

    boolean addToSameRow

##### addToSameRowCalled

    boolean addToSameRowCalled

##### bottomInset

    int bottomInset

##### c

    GridBagConstraints c

##### cancel

    Button cancel

##### cbIndex

    int cbIndex

##### centerDialog

    boolean centerDialog

##### checkbox

    Vector checkbox

##### choice

    Vector choice

##### choiceIndex

    int choiceIndex

##### customInsets

    boolean customInsets

##### defaultChoiceIndexes

    Vector defaultChoiceIndexes

##### defaultStrings

    Vector defaultStrings

##### defaultText

    Vector defaultText

##### defaultValues

    Vector defaultValues

##### dialogListeners

    Vector dialogListeners

##### echoChar

    char echoChar

##### errorMessage

    String errorMessage

##### firstNumericField

    boolean firstNumericField

##### firstPaint

    boolean firstPaint

##### firstSlider

    boolean firstSlider

##### fontSizeSet

    boolean fontSizeSet

##### help

    Button help

##### helpLabel

    String helpLabel

##### helpURL

    String helpURL

##### hideCancelButton

    boolean hideCancelButton

##### imagePanels

    Vector imagePanels

##### invalidNumber

    boolean invalidNumber

##### labels

    Hashtable labels

##### lastLabelAdded

    Label lastLabelAdded

##### leftInset

    int leftInset

##### macro

    boolean macro

##### macroOptions

    String macroOptions

##### nfIndex

    int nfIndex

##### no

    Button no

##### numberField

    Vector numberField

##### okay

    Button okay

##### optionsRecorded

    boolean optionsRecorded

##### pfr

    PlugInFilterRunner pfr

##### previewCheckbox

    Checkbox previewCheckbox

##### previewLabel

    String previewLabel

##### radioButtonGroups

    Vector radioButtonGroups

##### radioButtonIndex

    int radioButtonIndex

##### recorderOn

    boolean recorderOn

##### sfIndex

    int sfIndex

##### showDialogCalled

    boolean showDialogCalled

##### slider

    Vector slider

##### sliderDigits

    Vector sliderDigits

##### sliderIndexes

    Vector sliderIndexes

##### sliderScales

    Vector sliderScales

##### smartRecording

    boolean smartRecording

##### stringField

    Vector stringField

##### textArea1

    TextArea textArea1

##### textArea2

    TextArea textArea2

##### textAreaIndex

    int textAreaIndex

##### theLabel

    Component theLabel

##### topInset

    int topInset

##### wasCanceled

    boolean wasCanceled

##### wasOKed

    boolean wasOKed

##### windowIDs

    int[] windowIDs

##### windowTitles

    String[] windowTitles

### Class ij.gui.HistogramWindow

class HistogramWindow extends ImageWindow implements Serializable

#### Serialized Fields

##### bgThread

    Thread bgThread

##### blankLabel

    String blankLabel

##### cal

    Calibration cal

##### col1

    int col1

##### col2

    int col2

##### copy

    Button copy

##### count

    Label count

##### decimalPlaces

    int decimalPlaces

##### digits

    int digits

##### doUpdate

    boolean doUpdate

##### font

    Font font

##### frame

    Rectangle frame

##### histogram

    long[] histogram

##### list

    Button list

##### live

    Button live

##### log

    Button log

##### logScale

    boolean logScale

##### lut

    LookUpTable lut

##### newMaxCount

    long newMaxCount

##### plotScale

    int plotScale

##### rgb

    Button rgb

##### rgbMode

    int rgbMode

##### row1

    int row1

##### row2

    int row2

##### row3

    int row3

##### row4

    int row4

##### row5

    int row5

##### save

    Button save

##### showBins

    boolean showBins

##### srcImageID

    int srcImageID

##### srcImp

    ImagePlus srcImp

##### stackHistogram

    boolean stackHistogram

##### stats

    ImageStatistics stats

##### value

    Label value

##### yMax

    int yMax

### Class ij.gui.HTMLDialog

class HTMLDialog extends JDialog implements Serializable

#### Serialized Fields

##### editorPane

    JEditorPane editorPane

##### escapePressed

    boolean escapePressed

##### modal

    boolean modal

### Class ij.gui.ImageCanvas

class ImageCanvas extends Canvas implements Serializable

#### Serialized Fields

##### currentRoi

    Roi currentRoi

##### customRoi

    boolean customRoi

##### defaultColor

    Color defaultColor

##### disablePopupMenu

    boolean disablePopupMenu

##### drawNames

    boolean drawNames

##### dstHeight

    int dstHeight

##### dstWidth

    int dstWidth

##### firstFrame

    long firstFrame

##### flags

    int flags

##### flattening

    boolean flattening

##### font

    Font font

##### fps

    int fps

##### frames

    int frames

##### hideZoomIndicator

    boolean hideZoomIndicator

##### ij

    ImageJ ij

##### imageHeight

    int imageHeight

##### imageUpdated

    boolean imageUpdated

##### imageWidth

    int imageWidth

##### imp

    ImagePlus imp

##### labelRects

    Rectangle[] labelRects

##### lastZoomSX

    int lastZoomSX

Screen coordinates where the last zoom operation was done (initialized to impossible value)

##### lastZoomSY

    int lastZoomSY

##### magnification

    double magnification

##### maxBoundsReset

    boolean maxBoundsReset

##### mouseExited

    boolean mouseExited

##### mousePressedTime

    long mousePressedTime

##### mousePressedX

    int mousePressedX

##### mousePressedY

    int mousePressedY

##### offScreenHeight

    int offScreenHeight

##### offScreenImage

    Image offScreenImage

##### offScreenWidth

    int offScreenWidth

##### overOverlayLabel

    boolean overOverlayLabel

##### painted

    boolean painted

##### paintPending

    AtomicBoolean paintPending

##### pressTimer

    Timer pressTimer

##### resetMaxBoundsCount

    int resetMaxBoundsCount

##### roiPopupMenu

    PopupMenu roiPopupMenu

##### scaleToFit

    boolean scaleToFit

##### showAllOverlay

    Overlay showAllOverlay

##### showCursorStatus

    boolean showCursorStatus

##### srcRect

    Rectangle srcRect

##### sx2

    int sx2

##### sy2

    int sy2

##### xMouse

    int xMouse

##### xMouseStart

    int xMouseStart

##### xSrcStart

    int xSrcStart

##### yMouse

    int yMouse

##### yMouseStart

    int yMouseStart

##### ySrcStart

    int ySrcStart

##### zoomTargetOX

    int zoomTargetOX

Image (=offscreen) coordinates where the cursor was moved to for zooming

##### zoomTargetOY

    int zoomTargetOY

### Class ij.gui.ImagePanel

class ImagePanel extends Panel implements Serializable

#### Serialized Fields

##### img

    ImagePlus img

### Class ij.gui.ImageRoi

class ImageRoi extends Roi implements Serializable

#### Serialized Fields

##### angle

    double angle

##### composite

    Composite composite

##### img

    Image img

##### ip

    ImageProcessor ip

##### opacity

    double opacity

##### zeroTransparent

    boolean zeroTransparent

### Class ij.gui.ImageWindow

class ImageWindow extends Frame implements Serializable

#### Serialized Fields

##### closed

    boolean closed

##### ic

    ImageCanvas ic

##### ij

    ImageJ ij

##### imp

    ImagePlus imp

##### initialMagnification

    double initialMagnification

##### maxBounds

    Rectangle maxBounds

##### maxWindowBounds

    Rectangle maxWindowBounds

##### newCanvas

    boolean newCanvas

##### newHeight

    int newHeight

##### newWidth

    int newWidth

##### running

    boolean running

This variable is set false if the user presses the escape key or closes the window.

##### running2

    boolean running2

This variable is set false if the user clicks in this window, presses the escape key, or closes the window.

##### SCALE

    double SCALE

##### screenHeight

    int screenHeight

##### screenWidth

    int screenWidth

##### setMaxBoundsTime

    long setMaxBoundsTime

##### sliderHeight

    int sliderHeight

##### TEXT_GAP

    int TEXT_GAP

##### textGap

    int textGap

##### unzoomWhenMinimizing

    boolean unzoomWhenMinimizing

### Class ij.gui.Line

class Line extends Roi implements Serializable

#### Serialized Fields

##### dragged

    boolean dragged

##### mouseUpCount

    int mouseUpCount

##### startxd

    double startxd

##### startyd

    double startyd

##### x1

    int x1

##### x1d

    double x1d

##### x1R

    double x1R

##### x2

    int x2

##### x2d

    double x2d

##### x2R

    double x2R

##### y1

    int y1

##### y1d

    double y1d

##### y1R

    double y1R

##### y2

    int y2

##### y2d

    double y2d

##### y2R

    double y2R

### Class ij.gui.MessageDialog

class MessageDialog extends Dialog implements Serializable

#### Serialized Fields

##### button

    Button button

##### escapePressed

    boolean escapePressed

##### label

    MultiLineLabel label

### Class ij.gui.MultiLineLabel

class MultiLineLabel extends Canvas implements Serializable

#### Serialized Fields

##### line_ascent

    int line_ascent

##### line_height

    int line_height

##### line_widths

    int[] line_widths

##### lines

    String[] lines

##### margin_height

    int margin_height

##### margin_width

    int margin_width

##### max_width

    int max_width

##### min_width

    int min_width

##### num_lines

    int num_lines

### Class ij.gui.NonBlockingGenericDialog

class NonBlockingGenericDialog extends GenericDialog implements Serializable

#### Serialized Fields

##### imp

    ImagePlus imp

##### windowListener

    WindowListener windowListener

### Class ij.gui.OvalRoi

class OvalRoi extends Roi implements Serializable

### Class ij.gui.PlotCanvas

class PlotCanvas extends ImageCanvas implements Serializable

#### Serialized Fields

##### oldHeight

    int oldHeight

##### oldWidth

    int oldWidth

##### plot

    Plot plot

The plot displayed

##### rangeArrowIndexWhenPressed

    int rangeArrowIndexWhenPressed

##### xScrolled

    int xScrolled

##### yScrolled

    int yScrolled

### Class ij.gui.PlotWindow

class PlotWindow extends ImageWindow implements Serializable

#### Serialized Fields

##### activeRangeArrow

    int activeRangeArrow

##### bgThread

    Thread bgThread

##### data

    Button data

##### dataPopupMenu

    PopupMenu dataPopupMenu

##### defaultDigits

    int defaultDigits

##### doUpdate

    boolean doUpdate

##### list

    Button list

##### live

    Button live

##### markSize

    int markSize

##### menuItems

    MenuItem[] menuItems

##### more

    Button more

##### morePopupMenu

    PopupMenu morePopupMenu

##### plot

    Plot plot

##### plotMaker

    PlotMaker plotMaker

##### rangeArrowRois

    Roi[] rangeArrowRois

##### rangeArrowsVisible

    boolean rangeArrowsVisible

##### srcImp

    ImagePlus srcImp

##### statusLabel

    Label statusLabel

##### userStatusText

    String userStatusText

##### wasActivated

    boolean wasActivated

### Class ij.gui.PointRoi

class PointRoi extends PolygonRoi implements Serializable

#### Serialized Fields

##### addToOverlay

    boolean addToOverlay

##### counter

    int counter

##### counterInfo

    int[] counterInfo

##### counters

    short[] counters

##### counts

    int[] counts

##### lastPointTime

    long lastPointTime

##### nCounters

    int nCounters

##### nMarkers

    int nMarkers

##### positions

    int[] positions

##### promptBeforeDeleting

    boolean promptBeforeDeleting

##### promptBeforeDeletingCalled

    boolean promptBeforeDeletingCalled

##### rt

    ResultsTable rt

##### showLabels

    boolean showLabels

##### size

    int size

##### type

    int type

### Class ij.gui.PolygonRoi

class PolygonRoi extends Roi implements Serializable

#### Serialized Fields

##### angle1

    double angle1

##### boxSize

    int boxSize

##### clip

    Rectangle clip

##### degrees

    double degrees

##### maxPoints

    int maxPoints

##### mouseUpTime

    long mouseUpTime

##### nPoints

    int nPoints

##### splinePoints

    int splinePoints

##### userCreated

    boolean userCreated

##### xClipMax

    int xClipMax

##### xClipMin

    int xClipMin

##### xp

    int[] xp

##### xp2

    int[] xp2

##### xpf

    float[] xpf

##### xSpline

    float[] xSpline

##### yClipMax

    int yClipMax

##### yClipMin

    int yClipMin

##### yp

    int[] yp

##### yp2

    int[] yp2

##### ypf

    float[] ypf

##### ySpline

    float[] ySpline

### Class ij.gui.ProgressBar

class ProgressBar extends Canvas implements Serializable

#### Serialized Fields

##### backgroundColor

    Color backgroundColor

##### barColor

    Color barColor

##### batchMode

    boolean batchMode

##### canvasHeight

    int canvasHeight

##### canvasWidth

    int canvasWidth

##### dualDisplay

    boolean dualDisplay

##### fastX

    double fastX

##### fillColor

    Color fillColor

##### frameBrighter

    Color frameBrighter

##### frameDarker

    Color frameDarker

##### height

    int height

##### lastTime

    long lastTime

##### showBar

    boolean showBar

##### slowX

    double slowX

##### width

    int width

##### x

    int x

##### y

    int y

### Class ij.gui.Roi

class Roi extends Object implements Serializable

#### Serialized Fields

##### activeHandle

    int activeHandle

##### activeOverlayRoi

    boolean activeOverlayRoi

##### antiAlias

    boolean antiAlias

##### asp_bk

    double asp_bk

##### aspect

    boolean aspect

##### bounds

    Rectangle2D.Double bounds

##### cachedMask

    ImageProcessor cachedMask

##### center

    boolean center

##### channel

    int channel

##### clipboard

    ImagePlus clipboard

##### clipHeight

    int clipHeight

##### clipWidth

    int clipWidth

##### clipX

    int clipX

##### clipY

    int clipY

##### constrain

    boolean constrain

##### cornerDiameter

    int cornerDiameter

##### fillColor

    Color fillColor

##### flattenScale

    double flattenScale

##### frame

    int frame

##### group

    int group

##### handleColor

    Color handleColor

##### handleSize

    int handleSize

##### height

    int height

##### hyperstackPosition

    boolean hyperstackPosition

##### ic

    ImageCanvas ic

##### ignoreClipRect

    boolean ignoreClipRect

##### imageID

    int imageID

##### imp

    ImagePlus imp

##### instanceColor

    Color instanceColor

##### isCursor

    boolean isCursor

##### listenersNotified

    boolean listenersNotified

##### mag

    double mag

##### modState

    int modState

##### name

    String name

##### nonScalable

    boolean nonScalable

##### oldHeight

    int oldHeight

##### oldWidth

    int oldWidth

##### oldX

    int oldX

##### oldY

    int oldY

##### overlay

    boolean overlay

##### position

    int position

##### previousSX

    int previousSX

##### previousSY

    int previousSY

##### props

    Properties props

##### prototypeOverlay

    Overlay prototypeOverlay

##### scaleStrokeWidth

    boolean scaleStrokeWidth

##### slice

    int slice

##### startX

    int startX

##### startXD

    double startXD

##### startY

    int startY

##### startYD

    double startYD

##### state

    int state

##### stroke

    BasicStroke stroke

##### strokeColor

    Color strokeColor

##### subPixel

    boolean subPixel

##### type

    int type

##### updateFullWindow

    boolean updateFullWindow

##### wideLine

    boolean wideLine

##### width

    int width

##### x

    int x

##### xcenter

    double xcenter

##### xMax

    int xMax

##### y

    int y

##### ycenter

    double ycenter

##### yMax

    int yMax

### Class ij.gui.RotatedRectRoi

class RotatedRectRoi extends PolygonRoi implements Serializable

#### Serialized Fields

##### rectWidth

    double rectWidth

##### xstart

    double xstart

##### ystart

    double ystart

### Class ij.gui.SaveChangesDialog

class SaveChangesDialog extends Dialog implements Serializable

#### Serialized Fields

##### cancel

    Button cancel

##### cancelPressed

    boolean cancelPressed

##### dontSave

    Button dontSave

##### save

    Button save

##### savePressed

    boolean savePressed

### Class ij.gui.ScrollbarWithLabel

class ScrollbarWithLabel extends Panel implements Serializable

#### Serialized Fields

##### bar

    Scrollbar bar

##### icon

    ij.gui.ScrollbarWithLabel.Icon icon

##### stackWindow

    StackWindow stackWindow

### Class ij.gui.ShapeRoi

class ShapeRoi extends Roi implements Serializable

#### Serialized Fields

##### flatness

    double flatness

The instance value of the coefficient (FLATNESS) used to obtain a flattened version of this ROI's shape.

##### flatten

    boolean flatten

If true then methods that manipulate this ROI's shape will work on a flattened version of the shape.

##### forceAngle

    boolean forceAngle

Flag which specifies if Roi objects constructed from open (sub)paths composed of only two line segments will be of type `Roi.ANGLE`. If `true` then (sub)path will be parsed into a `Roi.ANGLE`; else, into a `Roi.POLYLINE`.

##### forceTrace

    boolean forceTrace

Flag which specifies how Roi objects will be constructed from closed (sub)paths having more than `MAXPOLY` and composed exclusively of line segments. If `true` then (sub)path will be parsed into a `Roi.TRACED_ROI`; else, into a `Roi.FREEROI`.

##### maxerror

    double maxerror

The instance value of the maximum tolerance (MAXERROR) allowed in calculating the length of the curve segments of this ROI's shape.

##### maxPoly

    int maxPoly

The instance value of MAXPOLY.

##### savedRois

    Vector savedRois

##### shape

    Shape shape

The `java.awt.Shape` encapsulated by this object.

### Class ij.gui.StackWindow

class StackWindow extends ImageWindow implements Serializable

#### Serialized Fields

##### animationSelector

    ScrollbarWithLabel animationSelector

##### c

    int c

##### cSelector

    ScrollbarWithLabel cSelector

##### done

    boolean done

##### hyperStack

    boolean hyperStack

##### nChannels

    int nChannels

##### nFrames

    int nFrames

##### nSlices

    int nSlices

##### slice

    int slice

##### sliceSelector

    Scrollbar sliceSelector

##### t

    int t

##### thread

    Thread thread

##### tSelector

    ScrollbarWithLabel tSelector

##### z

    int z

##### zSelector

    ScrollbarWithLabel zSelector

### Class ij.gui.TextRoi

class TextRoi extends Roi implements Serializable

#### Serialized Fields

##### angle

    double angle

##### firstChar

    boolean firstChar

##### firstMouseUp

    boolean firstMouseUp

##### font

    Font font

##### fontGraphics

    Graphics fontGraphics

##### justification

    int justification

##### previousMag

    double previousMag

##### previousRoi

    Roi previousRoi

##### theText

    String[] theText

### Class ij.gui.Toolbar

class Toolbar extends Canvas implements Serializable

#### Serialized Fields

##### addingSingleTool

    boolean addingSingleTool

##### arrowItem

    CheckboxMenuItem arrowItem

##### brighter

    Color brighter

##### brushItem

    CheckboxMenuItem brushItem

##### currentSet

    String currentSet

##### darker

    Color darker

##### disableRecording

    boolean disableRecording

##### doNotSavePrefs

    boolean doNotSavePrefs

##### down

    boolean[] down

##### ellipseItem

    CheckboxMenuItem ellipseItem

##### evenDarker

    Color evenDarker

##### freeLineItem

    CheckboxMenuItem freeLineItem

##### g

    Graphics g

##### gray

    Color gray

##### icon

    String icon

##### icons

    String[] icons

##### installingStartupTool

    boolean installingStartupTool

##### linePopup

    PopupMenu linePopup

##### lineType

    int lineType

##### macroInstaller

    MacroInstaller macroInstaller

##### menus

    PopupMenu[] menus

##### mouseDownTime

    long mouseDownTime

##### mpPrevious

    int mpPrevious

##### multiPointItem

    CheckboxMenuItem multiPointItem

##### names

    String[] names

##### nExtraTools

    int nExtraTools

##### ovalItem

    CheckboxMenuItem ovalItem

##### ovalPopup

    PopupMenu ovalPopup

##### pc

    int pc

##### pickerPopup

    PopupMenu pickerPopup

##### pointItem

    CheckboxMenuItem pointItem

##### pointPopup

    PopupMenu pointPopup

##### polyLineItem

    CheckboxMenuItem polyLineItem

##### pressTimer

    Timer pressTimer

##### previousTool

    int previousTool

##### ps

    Dimension ps

##### rectItem

    CheckboxMenuItem rectItem

##### rectPopup

    PopupMenu rectPopup

##### rotatedRectItem

    CheckboxMenuItem rotatedRectItem

##### roundRectItem

    CheckboxMenuItem roundRectItem

##### startupTime

    int startupTime

##### straightLineItem

    CheckboxMenuItem straightLineItem

##### switchPopup

    PopupMenu switchPopup

##### toolColor

    Color toolColor

##### tools

    PlugInTool[] tools

##### triangleColor

    Color triangleColor

##### x

    int x

##### xOffset

    int xOffset

##### y

    int y

##### yOffset

    int yOffset

##### zoomPopup

    PopupMenu zoomPopup

### Class ij.gui.TrimmedButton

class TrimmedButton extends Button implements Serializable

#### Serialized Fields

##### trim

    int trim

### Class ij.gui.WaitForUserDialog

class WaitForUserDialog extends Dialog implements Serializable

#### Serialized Fields

##### button

    Button button

##### cancelButton

    Button cancelButton

##### escPressed

    boolean escPressed

##### label

    MultiLineLabel label

### Class ij.gui.YesNoCancelDialog

class YesNoCancelDialog extends Dialog implements Serializable

#### Serialized Fields

##### cancelB

    Button cancelB

##### cancelPressed

    boolean cancelPressed

##### firstPaint

    boolean firstPaint

##### noB

    Button noB

##### yesB

    Button yesB

##### yesPressed

    boolean yesPressed

## Package ij.io

### Class ij.io.DragAndDropHandler

class DragAndDropHandler extends TransferHandler implements Serializable

#### Serialized Fields

##### jFileChooser

    JFileChooser jFileChooser

## Package ij.plugin.frame

### Class ij.plugin.frame.Channels

class Channels extends PlugInDialog implements Serializable

#### Serialized Fields

##### checkbox

    Checkbox[] checkbox

##### choice

    Choice choice

##### helpButton

    Button helpButton

##### id

    int id

##### moreButton

    Button moreButton

##### pm

    PopupMenu pm

### Class ij.plugin.frame.ColorPicker

class ColorPicker extends PlugInDialog implements Serializable

#### Serialized Fields

##### cg

    ij.plugin.frame.ColorGenerator cg

##### colorCanvas

    Canvas colorCanvas

##### colorField

    TextField colorField

##### colorHeight

    int colorHeight

##### colorWidth

    int colorWidth

##### columns

    int columns

##### rows

    int rows

### Class ij.plugin.frame.ColorThresholder

class ColorThresholder extends PlugInFrame implements Serializable

#### Serialized Fields

##### applyingStack

    boolean applyingStack

##### bandPassB

    Checkbox bandPassB

##### bandPassH

    Checkbox bandPassH

##### bandPassS

    Checkbox bandPassS

##### bplot

    ij.plugin.frame.ColorThresholder.BandPlot bplot

##### bSource

    byte[] bSource

##### colorSpace

    int colorSpace

##### colorSpaceChoice

    Choice colorSpaceChoice

##### colourMode

    CheckboxGroup colourMode

##### darkBackground

    Checkbox darkBackground

##### done

    boolean done

##### filteredB

    Button filteredB

##### flag

    boolean flag

##### height

    int height

##### helpB

    Button helpB

##### hSource

    byte[] hSource

##### ij

    ImageJ ij

##### label1

    Label label1

##### label2

    Label label2

##### label3

    Label label3

##### label4

    Label label4

##### label5

    Label label5

##### label6

    Label label6

##### labelb

    Label labelb

##### labelf

    Label labelf

##### labelh

    Label labelh

##### labels

    Label labels

##### macroB

    Button macroB

##### maxBri

    int maxBri

##### maxHue

    int maxHue

##### maxSat

    int maxSat

##### maxSlider

    Scrollbar maxSlider

##### maxSlider2

    Scrollbar maxSlider2

##### maxSlider3

    Scrollbar maxSlider3

##### methodChoice

    Choice methodChoice

##### minBri

    int minBri

##### minHue

    int minHue

##### minSat

    int minSat

##### minSlider

    Scrollbar minSlider

##### minSlider2

    Scrollbar minSlider2

##### minSlider3

    Scrollbar minSlider3

##### modeChoice

    Choice modeChoice

##### newB

    Button newB

##### numPixels

    int numPixels

##### numSlices

    int numSlices

##### originalB

    Button originalB

##### panel

    Panel panel

##### panelt

    Panel panelt

##### plot

    ij.plugin.frame.ColorThresholder.BandPlot plot

##### previousImageID

    int previousImageID

##### previousSlice

    int previousSlice

##### resetallB

    Button resetallB

##### sampleB

    Button sampleB

##### selectB

    Button selectB

##### sliderRange

    int sliderRange

##### splot

    ij.plugin.frame.ColorThresholder.BandPlot splot

##### sSource

    byte[] sSource

##### stack

    ImageStack stack

##### stackB

    Button stackB

##### thread

    Thread thread

##### width

    int width

### Class ij.plugin.frame.Commands

class Commands extends PlugInFrame implements Serializable

#### Serialized Fields

##### button

    Button button

##### command

    String command

##### list

    List list

### Class ij.plugin.frame.ContrastAdjuster

class ContrastAdjuster extends PlugInDialog implements Serializable

#### Serialized Fields

##### applyB

    Button applyB

##### autoB

    Button autoB

##### autoThreshold

    int autoThreshold

##### balance

    boolean balance

##### blankLabel12

    String blankLabel12

##### blankLabel8

    String blankLabel8

##### brightness

    int brightness

##### brightnessSlider

    Scrollbar brightnessSlider

##### brightnessValue

    int brightnessValue

##### c

    GridBagConstraints c

##### channels

    int channels

##### choice

    Choice choice

##### contrast

    int contrast

##### contrastSlider

    Scrollbar contrastSlider

##### contrastValue

    int contrastValue

##### defaultMax

    double defaultMax

##### defaultMin

    double defaultMin

##### digits

    int digits

##### doApplyLut

    boolean doApplyLut

##### doAutoAdjust

    boolean doAutoAdjust

##### done

    boolean done

##### doReset

    boolean doReset

##### doSet

    boolean doSet

##### gridbag

    GridBagLayout gridbag

##### ij

    ImageJ ij

##### levelLabel

    Label levelLabel

##### max

    double max

##### maxLabel

    Label maxLabel

##### maxSlider

    Scrollbar maxSlider

##### maxSliderValue

    int maxSliderValue

##### min

    double min

##### minLabel

    Label minLabel

##### minSlider

    Scrollbar minSlider

##### minSliderValue

    int minSliderValue

##### monoFont

    Font monoFont

##### panel

    Panel panel

##### plot

    ij.plugin.frame.ContrastPlot plot

##### previousImageID

    int previousImageID

##### previousMax

    double previousMax

##### previousMin

    double previousMin

##### previousSlice

    int previousSlice

##### previousType

    int previousType

##### resetB

    Button resetB

##### RGBImage

    boolean RGBImage

##### sanFont

    Font sanFont

##### scale

    double scale

##### setB

    Button setB

##### sliderRange

    int sliderRange

##### thread

    Thread thread

##### tPanel

    Panel tPanel

##### windowLabel

    Label windowLabel

##### windowLevel

    boolean windowLevel

##### y

    int y

### Class ij.plugin.frame.Editor

class Editor extends PlugInFrame implements Serializable

#### Serialized Fields

##### changes

    boolean changes

##### checkForCurlyQuotes

    boolean checkForCurlyQuotes

##### debugEnd

    int debugEnd

##### debugStart

    int debugStart

##### dontShowWindow

    boolean dontShowWindow

##### downloading

    boolean downloading

##### downloadUrl

    String downloadUrl

##### editMenu

    Menu editMenu

##### evaluator

    JavaScriptEvaluator evaluator

##### eventCount

    int eventCount

##### fileMenu

    Menu fileMenu

##### fontSizeIndex

    int fontSizeIndex

##### functionFinder

    FunctionFinder functionFinder

##### insertSpacesItem

    CheckboxMenuItem insertSpacesItem

##### installButton

    Button installButton

##### installer

    MacroInstaller installer

##### interactiveMode

    boolean interactiveMode

##### interpreter

    Interpreter interpreter

##### inUseCount

    int inUseCount

##### isMacroWindow

    boolean isMacroWindow

##### language

    Choice language

##### macroNames

    String[] macroNames

##### macrosMenu

    Menu macrosMenu

##### macroStarts

    int[] macroStarts

##### mb

    MenuBar mb

##### messageCount

    int messageCount

##### monospaced

    CheckboxMenuItem monospaced

##### nMacros

    int nMacros

##### p

    Properties p

##### path

    String path

##### performingUndo

    boolean performingUndo

##### pgm

    Program pgm

##### previousLine

    int previousLine

##### rejectMacrosMsg

    String rejectMacrosMsg

##### runButton

    Button runButton

##### runToLine

    int runToLine

##### shortcutsInUse

    String shortcutsInUse

##### sizes

    int[] sizes

##### step

    boolean step

##### ta

    TextArea ta

##### undoBuffer

    ArrayList undoBuffer

### Class ij.plugin.frame.Fitter

class Fitter extends PlugInFrame implements Serializable

#### Serialized Fields

##### apply

    Button apply

##### doIt

    Button doIt

##### dx

    double[] dx

##### dy

    double[] dy

##### fit

    Choice fit

##### fitTypeStr

    String fitTypeStr

##### open

    Button open

##### settings

    Checkbox settings

##### textArea

    TextArea textArea

##### x

    double[] x

##### y

    double[] y

### Class ij.plugin.frame.LineWidthAdjuster

class LineWidthAdjuster extends PlugInFrame implements Serializable

#### Serialized Fields

##### checkbox

    Checkbox checkbox

##### done

    boolean done

##### lineWidth0

    int lineWidth0

##### setText

    boolean setText

##### slider

    Scrollbar slider

##### sliderRange

    int sliderRange

##### tf

    TextField tf

##### thread

    Thread thread

##### value

    int value

### Class ij.plugin.frame.MemoryMonitor

class MemoryMonitor extends PlugInFrame implements Serializable

#### Serialized Fields

##### defaultMax

    double defaultMax

##### done

    boolean done

##### frames

    int frames

##### g

    Graphics2D g

##### image

    Image image

##### index

    int index

##### max

    double max

##### maxMemory

    long maxMemory

##### mem

    double[] mem

##### value

    long value

### Class ij.plugin.frame.PasteController

class PasteController extends PlugInFrame implements Serializable

#### Serialized Fields

##### panel

    Panel panel

##### pasteMode

    Choice pasteMode

### Class ij.plugin.frame.PlugInDialog

class PlugInDialog extends Dialog implements Serializable

### Class ij.plugin.frame.PlugInFrame

class PlugInFrame extends Frame implements Serializable

#### Serialized Fields

##### title

    String title

### Class ij.plugin.frame.Recorder

class Recorder extends PlugInFrame implements Serializable

#### Serialized Fields

##### createButton

    Button createButton

##### fileName

    TextField fileName

##### fitTypeStr

    String fitTypeStr

##### helpButton

    Button helpButton

##### mode

    Choice mode

##### runButton

    Button runButton

### Class ij.plugin.frame.RoiManager

class RoiManager extends PlugInFrame implements Serializable

#### Serialized Fields

##### allowDuplicates

    boolean allowDuplicates

##### allowRecording

    boolean allowRecording

##### appendResults

    boolean appendResults

##### canceled

    boolean canceled

##### colorButton

    Button colorButton

##### defaultColor

    Color defaultColor

##### defaultLineWidth

    int defaultLineWidth

##### firstTime

    boolean firstTime

##### ignoreInterrupts

    boolean ignoreInterrupts

##### imageID

    int imageID

##### labelsCheckbox

    Checkbox labelsCheckbox

##### list

    JList list

##### listModel

    DefaultListModel listModel

##### macro

    boolean macro

##### moreButton

    Button moreButton

##### multiCropFormatIndex

    int multiCropFormatIndex

##### multiCropSave

    boolean multiCropSave

##### multiCropShow

    boolean multiCropShow

##### noUpdateMode

    boolean noUpdateMode

##### overlayTemplate

    Overlay overlayTemplate

##### panel

    Panel panel

##### pm

    PopupMenu pm

##### prevID

    int prevID

##### recordShowAll

    boolean recordShowAll

##### rois

    ArrayList rois

##### showAllCheckbox

    Checkbox showAllCheckbox

##### translateX

    double translateX

##### translateY

    double translateY

### Class ij.plugin.frame.SyncWindows

class SyncWindows extends PlugInFrame implements Serializable

#### Serialized Fields

##### bSyncAll

    Button bSyncAll

Buttons for user control.

##### bUnsyncAll

    Button bUnsyncAll

Buttons for user control.

##### cChannel

    Checkbox cChannel

Checkboxes for user control.

##### cCoords

    Checkbox cCoords

Checkboxes for user control.

##### cCursor

    Checkbox cCursor

Checkboxes for user control.

##### cFrame

    Checkbox cFrame

Checkboxes for user control.

##### cScaling

    Checkbox cScaling

Checkboxes for user control.

##### cSlice

    Checkbox cSlice

Checkboxes for user control.

##### currentMag

    double currentMag

##### currentSrcRect

    Rectangle currentSrcRect

##### ijInstance

    ImageJ ijInstance

reference to current instance of ImageJ (to avoid repeated IJ.getInstance() s)

##### oldX

    int oldX

##### oldY

    int oldY

##### panel

    Panel panel

Panel for GUI

##### vListMap

    Vector vListMap

Hashtable to map list ids to image window ids.

##### vwins

    Vector vwins

Indices of synchronized image windows are maintained in this Vector.

##### wList

    List wList

List of currently displayed windows retrieved from ImageJ window manager.

##### x

    int x

##### y

    int y

### Class ij.plugin.frame.ThresholdAdjuster

class ThresholdAdjuster extends PlugInDialog implements Serializable

#### Serialized Fields

##### applyB

    Button applyB

##### autoB

    Button autoB

##### darkBackgroundCheckbox

    Checkbox darkBackgroundCheckbox

##### doApplyLut

    boolean doApplyLut

##### doAutoAdjust

    boolean doAutoAdjust

##### done

    boolean done

##### doReset

    boolean doReset

##### doSet

    boolean doSet

##### doStateChange

    boolean doStateChange

##### enterPressed

    boolean enterPressed

##### firstActivation

    boolean firstActivation

##### ij

    ImageJ ij

##### imageWasUpdated

    boolean imageWasUpdated

##### lutColor

    int lutColor

##### maxLabel

    TextField maxLabel

##### maxSlider

    Scrollbar maxSlider

##### maxThreshold

    double maxThreshold

##### maxValue

    int maxValue

##### methodChoice

    Choice methodChoice

##### minLabel

    TextField minLabel

##### minSlider

    Scrollbar minSlider

##### minThreshold

    double minThreshold

##### minValue

    int minValue

##### modeChoice

    Choice modeChoice

##### noReset

    boolean noReset

##### noResetCheckbox

    Checkbox noResetCheckbox

##### panel

    Panel panel

##### percentiles

    Label percentiles

##### plot

    ij.plugin.frame.ThresholdPlot plot

##### previousImageID

    int previousImageID

##### previousImageType

    int previousImageType

##### previousMax

    double previousMax

##### previousMin

    double previousMin

##### previousRoiHashCode

    int previousRoiHashCode

##### previousSlice

    int previousSlice

##### rawValues

    Checkbox rawValues

##### resetB

    Button resetB

##### setB

    Button setB

##### setButtonPressed

    boolean setButtonPressed

##### sixteenBit

    boolean sixteenBit

##### sixteenBitCheckbox

    Checkbox sixteenBitCheckbox

##### sliderRange

    int sliderRange

##### stackCheckbox

    Checkbox stackCheckbox

##### thread

    Thread thread

##### windowActivated

    boolean windowActivated

## Package ij.text

### Class ij.text.TextPanel

class TextPanel extends Panel implements Serializable

#### Serialized Fields

##### bDrag

    boolean bDrag

##### columnsManuallyAdjusted

    boolean columnsManuallyAdjusted

##### defaultCursor

    Cursor defaultCursor

##### editMenu

    Menu editMenu

##### fileMenu

    Menu fileMenu

##### filePath

    String filePath

##### headings

    boolean headings

##### iColCount

    int iColCount

##### iColDrag

    int iColDrag

##### iColWidth

    int[] iColWidth

##### iFirstRow

    int iFirstRow

##### iGridHeight

    int iGridHeight

##### iGridWidth

    int iGridWidth

##### iRowCount

    int iRowCount

##### iRowHeight

    int iRowHeight

##### iSbHeight

    int iSbHeight

##### iSbWidth

    int iSbWidth

##### iX

    int iX

##### iXDrag

    int iXDrag

##### iY

    int iY

##### keyListener

    KeyListener keyListener

##### labels

    String labels

##### menusExtended

    boolean menusExtended

##### mouseDownTime

    long mouseDownTime

##### pm

    PopupMenu pm

##### resizeCursor

    Cursor resizeCursor

##### rt

    ResultsTable rt

##### saveAsCSV

    boolean saveAsCSV

##### sbHoriz

    Scrollbar sbHoriz

##### sbVert

    Scrollbar sbVert

##### sColHead

    String[] sColHead

##### searchString

    String searchString

##### selEnd

    int selEnd

##### selLine

    int selLine

##### selOrigin

    int selOrigin

##### selStart

    int selStart

##### tc

    ij.text.TextCanvas tc

##### title

    String title

##### unsavedLines

    boolean unsavedLines

##### vData

    Vector vData

### Class ij.text.TextWindow

class TextWindow extends Frame implements Serializable

#### Serialized Fields

##### antialiasedButton

    CheckboxMenuItem antialiasedButton

##### fontSize

    int fontSize

##### isResultsTable

    boolean isResultsTable

##### mb

    MenuBar mb

##### monospacedButton

    CheckboxMenuItem monospacedButton

##### sizes

    int[] sizes

##### textPanel

    TextPanel textPanel