# Package htsjdk.variant.variantcontext.filter

package htsjdk.variant.variantcontext.filter

Related Packages
Package
Description
htsjdk.variant.variantcontext
htsjdk.variant.variantcontext.writer
Class
Description
CompoundFilter
A Predicate on VariantContexts that returns true when either all its sub-predicates are true, or none are false.
FilteringIterator
Deprecated.
since 2/29/16 use `FilteringVariantContextIterator` instead
FilteringVariantContextIterator
A filtering iterator for VariantContexts that takes a base iterator and a VariantContextFilter.
GenotypeQualityFilter
A Predicate on VariantContexts that returns true at sites that are either unfiltered, or passing (as variants).
HeterozygosityFilter
A Predicate on VariantContexts that either returns true at heterozygous sites (invertible to false).
JavascriptVariantFilter
JavaScript-based `VariantContextFilter`.
PassingVariantFilter
A Predicate on VariantContexts that returns true at sites that are either unfiltered, or passing (as variants).
SnpFilter
A Predicate on VariantContexts that returns true at sites that are SNPs
VariantContextFilter
API for filtering VariantContexts.