# Package htsjdk.beta.plugin.hapref

package htsjdk.beta.plugin.hapref

Related Packages
Package
Description
htsjdk.beta.plugin
htsjdk.beta.plugin.interval
htsjdk.beta.plugin.reads
htsjdk.beta.plugin.registry
htsjdk.beta.plugin.variants
Class
Description
HaploidReferenceCodec
Base class for all `HtsContentType.HAPLOID_REFERENCE` codecs.
HaploidReferenceDecoder
Base class for all `HtsContentType.HAPLOID_REFERENCE` decoders.
HaploidReferenceDecoderOptions
Class for haploid reference decoder options.
HaploidReferenceEncoder
Base class for all `HtsContentType.HAPLOID_REFERENCE` encoders.
HaploidReferenceEncoderOptions
Class for haploid reference encoder options.
HaploidReferenceFormats
Class with string constants representing the file formats supported by haploid reference codecs.
HapRefDecoderOptions
Class for haploid reference decoder options.