esl-selectn(1)

NAME
esl-selectn - select random subset of lines from file

SYNOPSIS
esl-selectn [options] nlines filename

DESCRIPTION

esl-selectn selects nlines lines at random from file filename and outputs them on stdout.

If filename is - (a single dash), input is read from stdin.

Uses an efficient reservoir sampling algorithm that only requires only a single pass through filename, and memory storage proportional to nlines (and importantly, not to the size of the file filename itself). esl-selectn can therefore be used to create large scale statistical sampling experiments, especially in combination with other Easel miniapplications.

OPTIONS

-h  Print brief help; includes version number and summary of all options, including expert options.

--seed <d>
    Set the random number seed to <d>, an integer >= 0. The default is 0, which means to use a randomly selected seed. A seed > 0 results in reproducible identical samples from different runs of the same command.

SEE ALSO

http://bioeasel.org/

COPYRIGHT

Copyright (C) 2023 Howard Hughes Medical Institute.
Freely distributed under the BSD open source license.

AUTHOR

http://eddylab.org