Package: hhsuite
Version: 3.3.0+ds-10
Architecture: arm64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 75638
Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libgomp1 (>= 6), libstdc++6 (>= 14), perl:any, hhsuite-data (= 3.3.0+ds-10), python3
Conflicts: ffindex
Built-Using: simde (= 0.8.2-3)
Section: science
Priority: optional
Homepage: https://toolkit.tuebingen.mpg.de/
Description: sensitive protein sequence searching based on HMM-HMM alignment
 HH-suite is an open-source software package for sensitive protein sequence
 searching based on the pairwise alignment of hidden Markov models (HMMs).
 .
 This package contains HHsearch and HHblits among other programs and utilities.
 .
 HHsearch takes as input a multiple sequence alignment (MSA) or profile HMM
 and searches a database of HMMs (e.g. PDB, Pfam, or InterPro) for homologous
 proteins. HHsearch is often used for protein structure prediction to detect
 homologous templates and to build highly accurate query-template pairwise
 alignments for homology modeling.
 .
 HHblits can build high-quality MSAs starting from single sequences or from
 MSAs. It transforms these into a query HMM and, using an iterative search
 strategy, adds significantly similar sequences from the previous search to
 the updated query HMM for the next search iteration. Compared to PSI-BLAST,
 HHblits is faster, up to twice as sensitive and produces more accurate
 alignments.
