gmap (2025-07-31+ds-1) unstable; urgency=medium

  * New upstream version 2025-07-31+ds
  * simd_fixes: refresh the patch.
  * c23.patch: delete: it is applied upstream.
  * d/copyright: remove unnecessarily excluded file.
  * d/control: declare compliance to standards version 4.7.2.
  * d/control: drop redundant Rules-Requires-Root: no.
  * d/watch: convert to watch file version 5.

 -- Étienne Mollier <emollier@debian.org>  Fri, 03 Oct 2025 20:59:18 +0200

gmap (2024-11-20+ds-2) unstable; urgency=medium

  * c23.patch: new: fix build failure with gcc 15. (Closes: #1096727)
  * d/control: declare compliance to standards version 4.7.1.

 -- Étienne Mollier <emollier@debian.org>  Tue, 25 Feb 2025 23:11:02 +0100

gmap (2024-11-20+ds-1) unstable; urgency=medium

  * New upstream version 2024-11-20+ds

 -- Étienne Mollier <emollier@debian.org>  Sat, 30 Nov 2024 18:46:00 +0100

gmap (2024-10-20+ds-1) unstable; urgency=medium

  * New upstream version 2024-10-20+ds
  * remove_getopt_code_copy.patch: unfuzz.
  * d/s/local-options: remove: avoid various latent interferences.
  * remove_getopt_code_copy.patch: normalize date.
  * d/patches/install-data-local: identified authorship.
  * d/salsa-ci.yml: disable reprotest.
    The test takes an exceedingly long time to run, so prefer to disable
    it to reduce stress on Salsa CI infrastructure.

 -- Étienne Mollier <emollier@debian.org>  Sun, 03 Nov 2024 19:32:41 +0100

gmap (2024-10-10+ds-1) unstable; urgency=medium

  * New upstream version 2024-10-10+ds
  * simd_fixes: patch unfuzz.

 -- Étienne Mollier <emollier@debian.org>  Fri, 18 Oct 2024 13:26:16 +0200

gmap (2024-09-18+ds-1) unstable; urgency=medium

  * New upstream version 2024-09-18+ds

 -- Étienne Mollier <emollier@debian.org>  Tue, 01 Oct 2024 20:15:51 +0200

gmap (2024-08-20+ds-1) unstable; urgency=medium

  * New upstream version 2024-08-20+ds
  * Unfuzz patches.
  * d/control: declare compliance to standards version 4.7.0.

 -- Étienne Mollier <emollier@debian.org>  Thu, 22 Aug 2024 20:06:35 +0200

gmap (2024-06-24+ds-1) unstable; urgency=medium

  * New upstream version 2024-06-24+ds

 -- Étienne Mollier <emollier@debian.org>  Sun, 14 Jul 2024 10:21:29 +0200

gmap (2024-05-20+ds-1) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * d/control: simplify architecture specifications by using provisions
    from the architecture-properties package.

  [ Étienne Mollier ]
  * New upstream version 2024-05-20+ds
  * Unfuzz patches.

 -- Étienne Mollier <emollier@debian.org>  Sun, 26 May 2024 11:46:52 +0200

gmap (2024-02-22+ds-1) unstable; urgency=medium

  * New upstream version 2024-02-22+ds
  * remove_getopt_code_copy.patch: refresh.
  * patch simd_fixes: refresh.
  * missing-include.patch: delete: file removed upstream.

 -- Étienne Mollier <emollier@debian.org>  Mon, 26 Feb 2024 21:01:08 +0100

gmap (2023-12-01+ds-2) unstable; urgency=medium

  * d/control: add support for loong64 architecture. (Closes: #1059092)
  * d/rules: update bindir and utildir.
    This fixes the production of manual pages.
  * d/rules: provide manual pages for gmapl and gsnapl.
  * d/gmap.lintian-overrides: override missing SIMD variant manuals.

 -- Étienne Mollier <emollier@debian.org>  Wed, 20 Dec 2023 19:04:49 +0100

gmap (2023-12-01+ds-1) unstable; urgency=medium

  * New upstream version
  * remove_getopt_code_copy.patch: refresh.
  * simd_fixes: patch refresh.
  * missing-include.patch: new.
    This patch fixes a build failure when targeting non-simd machines.

 -- Étienne Mollier <emollier@debian.org>  Fri, 08 Dec 2023 13:10:38 +0100

gmap (2023-10-10.v2+ds-1) unstable; urgency=medium

  * New upstream version

 -- Étienne Mollier <emollier@debian.org>  Wed, 29 Nov 2023 22:57:04 +0100

gmap (2023-10-10+ds-1) unstable; urgency=medium

  * New upstream version

 -- Étienne Mollier <emollier@debian.org>  Sat, 14 Oct 2023 20:21:01 +0200

gmap (2023-10-01+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version. Closes: #1041451
  * Refreshed patches.
  * d/patches/simd_fixes: ignore HAVE_TZCNT & HAVE_LZCNT

 -- Michael R. Crusoe <crusoe@debian.org>  Thu, 05 Oct 2023 15:30:54 +0200

gmap (2023-07-20+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 09 Aug 2023 18:17:18 +0200

gmap (2023-06-01+ds-1) unstable; urgency=medium

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)

  [ Michael R. Crusoe ]
  * Use debian package of SIMDe instead of code-copy.
  * d/patches/simd_fixes: fix compiling "lower" SIMD levels on processors that
    have more advanced features.
  * d/rules: build all SIMD variants for x86-64

 -- Andreas Tille <tille@debian.org>  Thu, 13 Jul 2023 14:30:43 +0200

gmap (2021-12-17+ds-3) unstable; urgency=medium

  * d/rules: fix logical error causing ftbfs on non-x86 architectures;
    this also fixes an unintended baseline violation on i386.

 -- Étienne Mollier <emollier@debian.org>  Mon, 03 Oct 2022 19:36:31 +0200

gmap (2021-12-17+ds-2) unstable; urgency=medium

  [ Nilesh Patra ]
  * [skip ci] Remove myself from uploaders

  [ Étienne Mollier ]
  * d/rules: enforce a given simd level for build reproducibility.
  * d/control: add myself to uploaders.
  * d/rules: disable simd on non-amd64 and limit to sse2 on amd64.
    (Closes: #1020793)
  * d/gmap.lintian-overrides: update mismatched override.
  * d/control: declare compliance to standards version 4.6.1.

 -- Étienne Mollier <emollier@debian.org>  Sun, 02 Oct 2022 18:00:07 +0200

gmap (2021-12-17+ds-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)

 -- Andreas Tille <tille@debian.org>  Sun, 16 Jan 2022 18:22:26 +0100

gmap (2021-08-25+ds-1) unstable; urgency=medium

  * New upstream version 2021-08-25+ds (Patches refreshed)

 -- Nilesh Patra <nilesh@debian.org>  Sat, 28 Aug 2021 20:13:44 +0530

gmap (2021-07-23+ds-1) unstable; urgency=medium

  * New upstream version 2021-07-23+ds
  * Remove merged patches d/p/{only-do-cpuid-on-amd64-i386.patch,cross}
  * Refresh d/p/{remove_getopt_code_copy.patch,install-data-local}

 -- Nilesh Patra <nilesh@debian.org>  Sun, 15 Aug 2021 18:23:39 +0530

gmap (2021-02-22+ds-1) unstable; urgency=high

  * Team upload.
  * New upstream release: "Fixed a fatal bug in GSNAP involving reads aligning
                           to the beginning of the genome"
  * debian/rules: fix from Adrian Bunk to fix the i386 build
  * Drop build-dep on dh-exec, not used any more
  * Forwarded patches upstream
  * Build on riscv64 as well

 -- Michael R. Crusoe <crusoe@debian.org>  Fri, 26 Feb 2021 08:15:33 +0100

gmap (2021-02-12+ds-1) unstable; urgency=medium

  * Team upload.
  * Apply patch from Helmut Grohne for slightly better cross building
    support. Closes: #980484
  * New upstream release.

 -- Michael R. Crusoe <crusoe@debian.org>  Fri, 19 Feb 2021 16:32:15 +0100

gmap (2020-12-17+ds-2) unstable; urgency=medium

  * Team upload.
  * Build on more architectures: arm64 armel armhf mips64el mipsel ppc64el

 -- Michael R. Crusoe <crusoe@debian.org>  Sun, 17 Jan 2021 17:18:31 +0100

gmap (2020-12-17+ds-1) unstable; urgency=medium

  * New upstream version

 -- Nilesh Patra <npatra974@gmail.com>  Sat, 19 Dec 2020 18:14:27 +0530

gmap (2020-11-20+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.5.1 (routine-update)

 -- Nilesh Patra <npatra974@gmail.com>  Tue, 24 Nov 2020 21:55:43 +0530

gmap (2020-11-14+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Drop fix-gcc10-build.patch

 -- Nilesh Patra <npatra974@gmail.com>  Fri, 20 Nov 2020 15:50:10 +0530

gmap (2020-10-27+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Nilesh Patra <npatra974@gmail.com>  Fri, 30 Oct 2020 18:19:41 +0530

gmap (2020-10-14+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Nilesh Patra <npatra974@gmail.com>  Wed, 21 Oct 2020 11:17:19 +0530

gmap (2020-10-12+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Nilesh Patra <npatra974@gmail.com>  Wed, 14 Oct 2020 16:08:58 +0530

gmap (2020-09-12+ds-1) unstable; urgency=medium

  * d/copyright, refresh Files-Exlcuded section
  * New upstream version 2020-09-12+ds

 -- Alexandre Mestiashvili <mestia@debian.org>  Fri, 18 Sep 2020 12:55:31 +0200

gmap (2020-06-30+ds-2) unstable; urgency=medium

  * Team Upload.
  * Refresh patch
  * Fix gcc-10 FTBFS (Closes: #966863)

 -- Nilesh Patra <npatra974@gmail.com>  Sat, 29 Aug 2020 21:03:54 +0530

gmap (2020-06-30+ds-1) unstable; urgency=medium

  * Build reproducibly
    Closes: #964960
  * New upstream version
  * debhelper-compat 13 (routine-update)

 -- Andreas Tille <tille@debian.org>  Mon, 13 Jul 2020 21:12:43 +0200

gmap (2020-04-08+ds1-2) unstable; urgency=medium

  * Update d/rules, make build reproducible, thanks to Chris Lamb
    Closes: #956549

 -- Alexandre Mestiashvili <mestia@debian.org>  Sat, 18 Apr 2020 20:38:39 +0200

gmap (2020-04-08+ds1-1) unstable; urgency=medium

  * Do not override missing manpages
  * Fix license
  * Do not ship AUTHORS as doc
  * Drop getopt from upstream source

 -- Andreas Tille <tille@debian.org>  Sat, 11 Apr 2020 18:29:21 +0200

gmap (2020-04-08+ds-1) unstable; urgency=medium

  * New upstream version
  * Upstream has released gmap under free license
  * Rework d/copyright
  * d/watch: dversionmangle

 -- Andreas Tille <tille@debian.org>  Sat, 11 Apr 2020 08:08:20 +0200

gmap (2020-03-12+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.5.0 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)

 -- Steffen Moeller <moeller@debian.org>  Tue, 31 Mar 2020 22:33:11 +0200

gmap (2019-09-12+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * debhelper-compat 12
  * Standards-Version: 4.4.1
  * Set upstream metadata fields: Bug-Submit (from ./configure).
  * Remove obsolete fields Name from debian/upstream/metadata.
  * Rely on pre-initialized dpkg-architecture variables.
  * Remove automake/-conf created files from source tree, adapt patch

 -- Steffen Moeller <moeller@debian.org>  Mon, 30 Dec 2019 02:05:39 +0100

# Older entries have been removed from this changelog.
# To read the complete changelog use `apt changelog gmap`.
