Package: golang-github-gogetdata-ggd-utils-dev
Source: ggd-utils
Version: 1.0.0+ds-1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 27
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: https://github.com/gogetdata/ggd-utils
Description: library for use in ggd
 Takes a genome file and (currently) a .vcf.gz or
 a .bed.gz and checks that:
 .
     * a .tbi is present
     * the VCF has ""##fileformat=VCF" as the first
     line
     * the VCF has a #CHROM header
     * the chromosome are in the order specified by
     the genome file (and present)
     * the positions are sorted
     * the positions are <= the chromosome lengths
     defined in the genome file.
 .
 As a result, any new genome going into GGD will have
 a .genome file that will dictate the sort order
 and presence or absence of the 'chr' prefix for chromosomes
 .
 This is the library package for ggd-utils
