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Data Structures
Here are the data structures with brief descriptions:

elastix |
CoreMainGTestUtilities |
Exception | Simple exception class, to be used by unit tests
ImageDomain |
TypeHolder | Eases passing a type as argument to a generic lambda
GTestUtilities |
ValueAndDerivative | Represents the value and derivative retrieved from a metric (cost function)
AdaGrad | A gradient descent optimizer with an adaptive gain
AdaptiveStochasticGradientDescent | A gradient descent optimizer with an adaptive gain
AdaptiveStochasticLBFGS | A gradient descent optimizer with an adaptive gain
MultiThreaderParameterType |
AdaptiveStochasticVarianceReducedGradient | A gradient descent optimizer with an adaptive gain
MultiThreaderParameterType |
AdvancedAffineTransformElastix | A transform based on the itk::AdvancedMatrixOffsetTransformBase
AdvancedBSplineTransform | A transform based on the itkAdvancedBSplineTransform
AdvancedKappaStatisticMetric | An metric based on the itk::AdvancedKappaStatisticImageToImageMetric
AdvancedMattesMutualInformationMetric | A metric based on the itk::ParzenWindowMutualInformationImageToImageMetric
AdvancedMeanSquaresMetric | An metric based on the itk::AdvancedMeanSquaresImageToImageMetric
AdvancedNormalizedCorrelationMetric | An metric based on the itk::AdvancedNormalizedCorrelationImageToImageMetric
AdvancedTransformAdapter | Adapts the ITK transform that is specified by AdvancedTransformAdapter::SetExternalTransform to the elastix AdvancedTransform interface
AffineDTITransformElastix | A transform based on the itk AffineDTITransform
AffineLogStackTransform | An affine log transform based on the itkStackTransform
AffineLogTransformElastix | This transform is an affine transformation, with a different parametrisation than the usual one
BaseComponent | Class that all elastix components should inherit from
BaseComponentSE | The BaseComponentSE class is a base class for elastix components that provides some basic functionality
BSplineInterpolator | An interpolator based on the itkBSplineInterpolateImageFunction
BSplineInterpolatorFloat | An interpolator based on the itk::BSplineInterpolateImageFunction
BSplineResampleInterpolator | A resample-interpolator based on B-splines
BSplineResampleInterpolatorFloat | A resample-interpolator based on B-splines
BSplineStackTransform | A B-spline transform based on the itkStackTransform
BSplineTransformWithDiffusion | This class combines a B-spline transform with the diffusion/filtering of the deformation field
CMAEvolutionStrategy | An optimizer based on the itk::CMAEvolutionStrategyOptimizer
ComponentDatabase | Class that stores the New() functions of all components
ComponentInstaller |
ComponentInstaller< TComponent, NrOfSupportedImageTypes+1 > |
ComponentLoader | Determines which components (metrics, transforms, etc.) are available
Configuration | A class that deals with user given parameters and command line arguments
ConjugateGradient | An optimizer based on the itk::GenericConjugateGradientOptimizer
ConjugateGradientFRPR | The ConjugateGradientFRPR class
Conversion | A class that contains utility functions for the conversion of number of seconds and parameter values to text
CorrespondingPointsEuclideanDistanceMetric | An metric based on the itk::CorrespondingPointsEuclideanDistancePointMetric
DefaultConstruct |
DefaultResampler | A resampler based on the itk::ResampleImageFilter
DeformationFieldTransform | A transform based on a DeformationField
DisplacementMagnitudePenalty | A penalty term that penalises ||T(x)-x||
DistancePreservingRigidityPenalty | A penalty term designed to preserve inter-voxel distances within rigid body regions
ELASTIX |
ElastixBase | This class creates an interface for elastix
MultipleImageLoader |
ElastixMain | A class with all functionality to configure elastix
ElastixTemplate | The main elastix class, which connects components and invokes the BeforeRegistration(), BeforeEachResolution(), etc. methods
ElastixTypedef |
EulerStackTransform | A stack transform based on the itk EulerTransforms
EulerTransformElastix | A transform based on the itk EulerTransforms
ExternalTransform | An external transform
FiniteDifferenceGradientDescent | An optimizer based on the itk::FiniteDifferenceGradientDescentOptimizer
FixedGenericPyramid | A pyramid based on the itk::GenericMultiResolutionPyramidImageFilter
FixedImageDimensionSupport |
FixedImageDimensionSupport< maxSupportedImageDimension+1 > |
FixedImagePyramidBase | This class is the elastix base class for all FixedImagePyramids
FixedRecursivePyramid | A pyramid based on the itk::RecursiveMultiResolutionPyramidImageFilter
FixedShrinkingPyramid | A pyramid based on the itk::MultiResolutionShrinkPyramidImageFilter
FixedSmoothingPyramid | A pyramid based on the itk::MultiResolutionGaussianSmoothingPyramidImageFilter
FullSampler | An interpolator based on the itk::ImageFullSampler
FullSearch | An optimizer based on the itk::FullSearchOptimizer
GenericPyramidHelper |
GradientDifferenceMetric | An metric based on the itk::GradientDifferenceImageToImageMetric
GridSampler | An interpolator based on the itk::ImageGridSampler
ImageSamplerBase | This class is the elastix base class for all ImageSamplers
InstallFunctions | A class with functions that are used to install elastix components
InterpolatorBase | This class is the elastix base class for all Interpolators
IterationInfo |
KNNGraphAlphaMutualInformationMetric | A metric based on the itk::KNNGraphAlphaMutualInformationImageToImageMetric
LinearInterpolator | An interpolator based on the itk::AdvancedLinearInterpolateImageFunction
LinearResampleInterpolator | A linear resample-interpolator
log |
guard |
MainBase | Common (abstract) base class of ElastixMain and TransformixMain
MetricBase | This class is the elastix base class for all Metrics
MissingStructurePenalty |
MovingGenericPyramid | A pyramid based on the itk::GenericMultiResolutionPyramidImageFilter
MovingImagePyramidBase | This class is the elastix base class for all MovingImagePyramids
MovingRecursivePyramid | A pyramid based on the itkRecursiveMultiResolutionPyramidImageFilter
MovingShrinkingPyramid | A pyramid based on the itk::MultiResolutionShrinkPyramidImageFilter
MovingSmoothingPyramid | A pyramid based on the itkMultiResolutionGaussianSmoothingPyramidImageFilter
MultiBSplineTransformWithNormal | A transform based on the itkMultiBSplineDeformableTransformWithNormal
MultiInputRandomCoordinateSampler | An interpolator based on the itk::MultiInputImageRandomCoordinateSampler
MultiMetricMultiResolutionRegistration | A registration framework based on the itk::MultiMetricMultiResolutionImageRegistrationMethod
MultiResolutionRegistration | A registration framework based on the itk::MultiResolutionImageRegistrationMethod
MultiResolutionRegistrationWithFeatures | A registration framework based on the itk::MultiResolutionImageRegistrationMethodWithFeatures
NearestNeighborInterpolator | An interpolator based on the itkNearestNeighborInterpolateImageFunction
NearestNeighborResampleInterpolator | A nearest neighbor resample-interpolator
NormalizedGradientCorrelationMetric | An metric based on the itk::NormalizedGradientCorrelationImageToImageMetric
NormalizedMutualInformationMetric | A metric based on the itk::ParzenWindowNormalizedMutualInformationImageToImageMetric
OpenCLFixedGenericPyramid | A pyramid based on the itk::GenericMultiResolutionPyramidImageFilter. The parameters used in this class are:
OpenCLMovingGenericPyramid | A pyramid based on the itk::GenericMultiResolutionPyramidImageFilter. The parameters used in this class are:
OpenCLResampler | A resampler based on the itk::GPUResampleImageFilter. The parameters used in this class are:
OptimizerBase | This class is the elastix base class for all Optimizers
SettingsType |
ParameterObject |
PatternIntensityMetric | An metric based on the itk::PatternIntensityImageToImageMetric

PCAMetric

- This metric is based on the AdvancedImageToImageMetric. It is templated over the type of the fixed and moving images to be compared

PCAMetric2 | This metric is based on the AdvancedImageToImageMetric. It is templated over the type of the fixed and moving images to be compared

PolydataDummyPenalty

A dummy metric to generate transformed meshes at each iteration. This metric does not contribute to the cost function, but provides the options to read vtk polydata meshes from the command-line and write the transformed meshes to disk each iteration or resolution level. The command-line options for input meshes is: -fmesh<[A-Z]><MetricNumber>. This metric can be used as a base for other mesh-based penalties

Powell | An optimizer based on Powell..
PreconditionedStochasticGradientDescent | A gradient descent optimizer with an adaptive gain
ProgressCommand | A specialized Command object for updating the progress of a filter
QuasiNewtonLBFGS | An optimizer based on the itk::QuasiNewtonLBFGSOptimizer
RandomCoordinateSampler | An interpolator based on the itk::ImageRandomCoordinateSampler
RandomSampler | An interpolator based on the itk::ImageRandomSampler
RandomSamplerSparseMask | An interpolator based on the itk::ImageRandomSamplerSparseMask
RayCastInterpolator | An interpolator based on the itkAdvancedRayCastInterpolateImageFunction
RayCastResampleInterpolator | An interpolator based on ..
RecursiveBSplineTransform | A transform based on the itkRecursiveBSplineTransform
ReducedDimensionBSplineInterpolator | An interpolator based on the itkReducedDimensionBSplineInterpolateImageFunction
ReducedDimensionBSplineResampleInterpolator | A resample-interpolator based on B-splines which ignores the last dimension
RegistrationBase | This class is the elastix base class for all Registration schemes
RegularStepGradientDescent | An optimizer based on gradient descent..
ResampleInterpolatorBase | This class is the elastix base class for all ResampleInterpolators
ResamplerBase |
RSGDEachParameterApart | An optimizer based on gradient descent
SimilarityTransformElastix | A transform based on the itk SimilarityTransforms
Simplex | An optimizer based on Simplex..
SimultaneousPerturbation | An optimizer based on the itk::SPSAOptimizer
SplineKernelTransform | A transform based on the itk::KernelTransform2
StandardGradientDescent | A gradient descent optimizer with a decaying gain
StatisticalShapePenalty | An metric based on the itk::StatisticalShapePointPenalty
SumOfPairwiseCorrelationCoefficientsMetric | Compute the sum of correlation coefficients between images in the slowest varying dimension in the moving image
SumSquaredTissueVolumeDifferenceMetric | A metric based on the itk::SumSquaredTissueVolumeDifferenceImageToImageMetric
TransformBase | This class is the elastix base class for all Transforms
TransformBendingEnergyPenalty | A penalty term based on the bending energy of a thin metal sheet
TransformFactoryRegistration |
TransformIO |
TransformixMain | A class with all functionality to configure transformix
TransformRigidityPenalty | A penalty term based on non-rigidity
TranslationStackTransform |
TranslationTransformElastix | A transform based on the itk::TranslationTransform
VarianceOverLastDimensionMetric | Compute the sum of variances over the slowest varying dimension in the moving image
WeightedCombinationTransformElastix | A transform based on the itk::WeightedCombinationTransform
itk |
Functor |
GPUFunctorBase | Base functor class for GPU functor image filters
Statistics |
ListSampleCArray | A ListSampleBase that internally uses a CArray, which can be accessed
AdaptiveStepsizeOptimizer | This class implements a gradient descent optimizer with adaptive gain
AdaptiveStochasticGradientDescentOptimizer | This class implements a gradient descent optimizer with adaptive gain
AdaptiveStochasticLBFGSOptimizer |
AdaptiveStochasticVarianceReducedGradientOptimizer | This class implements a gradient descent optimizer with adaptive gain
AdvancedBSplineDeformableTransform | Deformable transform using a B-spline representation
AdvancedBSplineDeformableTransformBase | Base class for deformable transform using a B-spline representation
AdvancedCombinationTransform | This class combines two transforms: an 'initial transform' with a 'current transform'
AdvancedEuler3DTransform | AdvancedEuler3DTransform of a vector space (e.g. space coordinates)
AdvancedIdentityTransform | Implementation of an Identity Transform
AdvancedImageMomentsCalculator | Compute moments of an n-dimensional image
ComputePerThreadStruct |
MultiThreaderParameterType |
AdvancedImageToImageMetric | An extension of the ITK ImageToImageMetric. It is the intended base class for all elastix metrics
DummyMask |
GetValueAndDerivativePerThreadStruct |
MultiThreaderParameterType |
AdvancedKappaStatisticImageToImageMetric | Computes similarity between two objects to be registered
KappaGetValueAndDerivativePerThreadStruct |
MultiThreaderAccumulateDerivativeType |
AdvancedLinearInterpolateImageFunction | Linearly interpolate an image at specified positions
AdvancedMatrixOffsetTransformBase |
AdvancedMeanSquaresImageToImageMetric | Compute Mean square difference between two images, based on AdvancedImageToImageMetric..
AdvancedNormalizedCorrelationImageToImageMetric | Computes normalized correlation between two images, based on AdvancedImageToImageMetric..
CorrelationGetValueAndDerivativePerThreadStruct |
MultiThreaderAccumulateDerivativeType |
AdvancedRayCastInterpolateImageFunction | Projective interpolation of an image at specified positions
AdvancedRigid2DTransform | AdvancedRigid2DTransform of a vector space (e.g. space coordinates)
AdvancedRigid3DTransform | AdvancedRigid3DTransform of a vector space (e.g. space coordinates)
AdvancedSimilarity2DTransform | AdvancedSimilarity2DTransform of a vector space (e.g. space coordinates)
AdvancedSimilarity3DTransform | AdvancedSimilarity3DTransform of a vector space (e.g. space coordinates)
AdvancedTransform | Transform maps points, vectors and covariant vectors from an input space to an output space
AdvancedTranslationTransform | Translation transformation of a vector space (e.g. space coordinates)
AdvancedVersorRigid3DTransform | AdvancedVersorRigid3DTransform of a vector space (e.g. space coordinates)
AdvancedVersorTransform |
AffineDTI2DTransform |
AffineDTI3DTransform | AffineDTI3DTransform of a vector space (e.g. space coordinates)
AffineLogStackTransform |
AffineLogTransform |
ANNbdTree |
ANNBinaryTreeCreator |
ANNBruteForceTree |
ANNFixedRadiusTreeSearch |
ANNkDTree |
ANNPriorityTreeSearch |
ANNStandardTreeSearch |
BinaryANNTreeBase |
BinaryANNTreeSearchBase |
BinaryTreeBase |
BinaryTreeSearchBase |
BSplineDerivativeKernelFunction2 | Derivative of a B-spline kernel used for density estimation and nonparametric regression
BSplineInterpolationDerivativeWeightFunction | Returns the weights over the support region used for B-spline interpolation/reconstruction
BSplineInterpolationSecondOrderDerivativeWeightFunction | Returns the weights over the support region used for B-spline interpolation/reconstruction
BSplineInterpolationWeightFunction2 | Returns the weights over the support region used for B-spline interpolation/reconstruction
BSplineInterpolationWeightFunctionBase | Returns the weights over the support region used for B-spline interpolation/reconstruction
BSplineKernelFunction2 | B-spline kernel used for density estimation and nonparameteric regression
BSplineSecondOrderDerivativeKernelFunction2 | Derivative of a B-spline kernel used for density estimation and nonparametric regression
BSplineStackTransform |
CenteredTransformInitializer2 | CenteredTransformInitializer2 is a helper class intended to initialize the center of rotation and the translation of Transforms having the center of rotation among their parameters
CMAEvolutionStrategyOptimizer | A Covariance Matrix Adaptation Evolution Strategy Optimizer
CombinationImageToImageMetric | Combines multiple metrics
ComputeDisplacementDistribution | This is a helper class for the automatic parameter estimation of the ASGD optimizer
ComputePerThreadStruct |
MultiThreaderParameterType |
ComputeImageExtremaFilter | Compute minimum and maximum pixel value of an Image
MinMaxResult |
ComputeJacobianTerms | This is a helper class for the automatic parameter estimation of the ASGD optimizer
ComputePreconditionerUsingDisplacementDistribution | This is a helper class for the automatic estimation of a preconditioner for the FPSGD optimizer. // update below More specifically this class computes the Jacobian terms related to the automatic parameter estimation for the adaptive stochastic gradient descent optimizer. Details can be found in the TMI paper
CorrespondingPointsEuclideanDistancePointMetric | Computes the Euclidean distance between a moving point-set and a fixed point-set. Correspondence is needed
CyclicBSplineDeformableTransform | Deformable transform using a B-spline representation in which the B-spline grid is formulated in a cyclic way
CyclicGridScheduleComputer | This class computes all information about the B-spline grid
DeformationFieldInterpolatingTransform | Transform that interpolates a given deformation field
DeformationFieldRegulizer | This class combines any itk transform with the DeformationFieldTransform
DeformationVectorFieldTransform | An itk transform based on a DeformationVectorField
DisplacementMagnitudePenaltyTerm | A cost function that calculates
DistancePreservingRigidityPenaltyTerm |
ElasticBodyReciprocalSplineKernelTransform2 |
ElasticBodySplineKernelTransform2 |
ElastixRegistrationMethod |
ErodeMaskImageFilter |
EulerStackTransform |
EulerTransform | This class combines the Euler2DTransform with the Euler3DTransform
EulerTransform< TScalarType, 3 > |
ExponentialLimiterFunction | A soft limiter
FFTImageFilterInitFactoryRegisterManager |
FiniteDifferenceGradientDescentOptimizer | An optimizer based on gradient descent ..
FullSearchOptimizer | An optimizer based on full search
GenericConjugateGradientOptimizer | A set of conjugate gradient algorithms
GenericMultiResolutionPyramidImageFilter | Framework for creating images in a multi-resolution pyramid
GPUAdvancedBSplineDeformableTransform | GPU version of AdvancedBSplineDeformableTransform
GPUAdvancedCombinationTransform | GPU version of AdvancedCombinationTransform
GPUAdvancedCombinationTransformCopier | A helper class which creates an GPU AdvancedCombinationTransform which is perfect copy of the CPU AdvancedCombinationTransform
TransformSpaceDimensionToType |
GPUAdvancedCombinationTransformFactory2 |
GPUAdvancedEuler2DTransform | GPU version of AdvancedEuler2DTransform
GPUAdvancedEuler2DTransformFactory2 |
GPUAdvancedEuler3DTransform | GPU version of AdvancedEuler3DTransform
GPUAdvancedEuler3DTransformFactory2 |
GPUAdvancedMatrixOffsetTransformBase | GPU version of AdvancedMatrixOffsetTransformBase
GPUAdvancedMatrixOffsetTransformBaseFactory2 |
GPUAdvancedSimilarity2DTransform | GPU version of AdvancedSimilarity2DTransform
GPUAdvancedSimilarity2DTransformFactory2 |
GPUAdvancedSimilarity3DTransform | GPU version of AdvancedSimilarity3DTransform
GPUAdvancedSimilarity3DTransformFactory2 |
GPUAdvancedTranslationTransform | GPU version of AdvancedTranslationTransform
GPUAdvancedTranslationTransformFactory2 |
GPUAffineTransform | GPU version of AffineTransform
GPUAffineTransformFactory2 |
GPUBSplineBaseTransform | GPU base class for the BSplineTransform
GPUBSplineDecompositionImageFilter | GPU version of BSplineDecompositionImageFilter
GPUBSplineDecompositionImageFilterFactory2 | Object Factory implementation for GPUBSplineDecompositionImageFilter
GPUBSplineInterpolateImageFunction | GPU version of BSplineInterpolateImageFunction
GPUBSplineInterpolateImageFunctionFactory2 | Object Factory implementation for GPUBSplineInterpolateImageFunction
GPUBSplineTransform | GPU version of BSplineTransform
GPUBSplineTransformFactory2 |
GPUCastImageFilter | GPU version of CastImageFilter
GPUCastImageFilterFactory2 | Object Factory implementation for GPUCastImageFilter
GPUCompositeTransform | GPU version of CompositeTransform
GPUCompositeTransformBase |
GPUCompositeTransformCopier | A helper class which creates an GPU composite transform which is perfect copy of the CPU composite transform
GPUCompositeTransformFactory2 |
GPUDataManager | GPU memory manager implemented using OpenCL. Required by GPUImage class
GPUEuler2DTransform | GPU version of Euler2DTransform
GPUEuler2DTransformFactory2 |
GPUEuler3DTransform | GPU version of Euler3DTransform
GPUEuler3DTransformFactory2 |
GPUIdentityTransform | GPU version of IdentityTransform
GPUIdentityTransformFactory2 |
GPUImage | Templated n-dimensional image class for the GPU
Rebind |
GPUImageBase1D |
GPUImageBase2D |
GPUImageBase3D |
GPUImageDataManager |
GPUImageFactory2 | Object Factory implementation for GPUImage
GPUImageToImageFilter | Class to abstract the behaviour of the GPU filters
GPUInPlaceImageFilter | Base class for GPU filters that take an image as input and overwrite that image as the output
GPUInterpolateImageFunction | GPU version of InterpolateImageFunction
GPUInterpolatorBase | Base class fro all GPU interpolators
GPUInterpolatorCopier | A helper class which creates an GPU interpolator which is perfect copy of the CPU interpolator
GPULinearInterpolateImageFunction | GPU version of LinearInterpolateImageFunction
GPULinearInterpolateImageFunctionFactory2 | Object Factory implementation for GPULinearInterpolateImageFunction
GPUMatrixOffsetTransformBase | Base version of the GPU MatrixOffsetTransform
GPUNearestNeighborInterpolateImageFunction | GPU version of NearestNeighborInterpolateImageFunction
GPUNearestNeighborInterpolateImageFunctionFactory2 | Object Factory implementation for GPUNearestNeighborInterpolateImageFunction
GPUObjectFactoryBase | Base class for all GPU factory classes
GPURecursiveGaussianImageFilter | GPU version of RecursiveGaussianImageFilter
GPURecursiveGaussianImageFilterFactory2 | Object Factory implementation for GPURecursiveGaussianImageFilter
GPUResampleImageFilter | GPU version of ResampleImageFilter
GPUResampleImageFilterFactory2 | Object Factory implementation for GPUResampleImageFilter
GPUShrinkImageFilter | GPU version of ShrinkImageFilter
GPUShrinkImageFilterFactory2 | Object Factory implementation for GPUShrinkImageFilter
GPUSimilarity2DTransform | GPU version of Similarity2DTransform
GPUSimilarity2DTransformFactory2 |
GPUSimilarity3DTransform | GPU version of Similarity3DTransform
GPUSimilarity3DTransformFactory2 |
GPUTransformBase | Base class for all GPU transforms
GPUTransformCopier | A helper class which creates an GPU transform which is perfect copy of the CPU transform
TransformSpaceDimensionToType |
GPUTranslationTransform | GPU version of TranslationTransform
GPUTranslationTransformBase | Base class for all GPU translation transforms
GPUTranslationTransformFactory2 |
GPUUnaryFunctorImageFilter | Implements pixel-wise generic operation on one image using the GPU
GradientDescentOptimizer2 | Implement a gradient descent optimizer
GradientDifferenceImageToImageMetric | Computes similarity between two objects to be registered
GridScheduleComputer | This class computes all information about the B-spline grid, given the image information and the desired grid spacing
HardLimiterFunction | A hard limiter
ImageFileCastWriter | Casts pixel type and writes image data
ImageFullSampler | Samples all voxels in the InputImageRegion
UserData |
WorkUnit |
ImageGridSampler | Samples image voxels on a regular grid
UserData |
WorkUnit |
ImageIOFactoryRegisterManager |
ImageRandomCoordinateSampler | Samples an image by randomly composing a set of physical coordinates
UserData |
ImageRandomSampler | Samples randomly some voxels of an image
UserData |
ImageRandomSamplerBase | This class is a base class for any image sampler that randomly picks samples
ImageRandomSamplerSparseMask | Samples randomly some voxels of an image
UserData |
ImageSample | A class that defines an image sample, which is the coordinates of a point and its value
ImageSamplerBase | This class is a base class for any image sampler
ImageToImageMetricWithFeatures | Computes similarity between regions of two images
KernelFunctionBase2 | Kernel used for density estimation and nonparameteric regression
KernelTransform2 |
KNNGraphAlphaMutualInformationImageToImageMetric | Computes similarity between two images to be registered
LimiterFunctionBase | Base class for all ITK limiter function objects
LineSearchOptimizer | A base class for LineSearch optimizers
MeshFileReaderBase | Base class for mesh readers
MeshIOFactoryRegisterManager |
MeshPenalty | A dummy metric to generate transformed meshes each iteration
MevisDicomTiffImageIO |
MevisDicomTiffImageIOFactory | Create instances of MevisDicomTiffImageIO objects using an object factory
MissingVolumeMeshPenalty | Computes the (pseudo) volume of the transformed surface mesh of a structure.
MoreThuenteLineSearchOptimizer | ITK version of the MoreThuente line search algorithm
MultiBSplineDeformableTransformWithNormal | This transform is a composition of B-spline transformations, allowing sliding motion between different labels
MultiInputImageRandomCoordinateSampler | Samples an image by randomly composing a set of physical coordinates
MultiInputImageToImageMetricBase | Implements a metric base class that takes multiple inputs
MultiInputMultiResolutionImageRegistrationMethodBase | Base class for multi-resolution image registration methods
MultiMetricMultiResolutionImageRegistrationMethod | Base class for multi-resolution image registration methods
MultiOrderBSplineDecompositionImageFilter | Calculates the B-Spline coefficients of an image. Spline order may be per dimension from 0 to 5 per
MultiResolutionGaussianSmoothingPyramidImageFilter | Framework for creating images in a multi-resolution pyramid
MultiResolutionImageRegistrationMethod2 | Base class for multi-resolution image registration methods
MultiResolutionImageRegistrationMethodWithFeatures | Class for multi-resolution image registration methods
MultiResolutionShrinkPyramidImageFilter | Framework for creating images in a multi-resolution pyramid
NDImageBase | An image whose dimension can be specified at runtime
NDImageTemplate | This class is a specialization of the NDImageBase, which acts as a wrap around an itk::Image
NormalizedGradientCorrelationImageToImageMetric | An metric based on the itk::NormalizedGradientCorrelationImageToImageMetric
OpenCLBuffer | OpenCL buffer object
OpenCLCommandQueue | OpenCL a command-queue on a specific device and valid OpenCLContext
OpenCLCompileError |
OpenCLContext | OpenCL context
OpenCLContextScopeGuard |
OpenCLDefaultImageDimentions | Default OpenCL image dimensions support struct
OpenCLDevice | Collection of OpenCL devices to be used by the host
OpenCLEvent | OpenCLEvent class represents an OpenCL event object
OpenCLEventList | OpenCLEventList class represents a list of OpenCLEvent objects
OpenCLImage | Image object is used to store a one, two or three dimensional texture, frame-buffer or image
OpenCLImageFormat | Format of a OpenCLImage
OpenCLKernel | Executable entry point function in an OpenCL program
OpenCLKernelManager | OpenCL kernel manager implemented using OpenCL
KernelArgumentList |
OpenCLKernelToImageBridge |
OpenCLLogger | Used for logging OpenCL compiler errors during a run
OpenCLMemoryObject | All common memory objects such as buffers and image objects
OpenCLPlatform | The OpenCLPlatform represent platform model for OpenCL
OpenCLProfilingTimeProbe | Computes the time passed between two points in code
OpenCLProgram | OpenCL program object
OpenCLSampler | OpenCL sampler object
OpenCLSize | Defines the size of an item of work for an OpenCL kernel
Null |
OpenCLUserEvent | OpenCL user events
OpenCLVector | The OpenCLVector class represents a templated OpenCL buffer object
OpenCLVectorBase | The base class for the OpenCLVector implementation
ParabolicErodeDilateImageFilter | Parent class for morphological operations with parabolic structuring elements
ParabolicErodeImageFilter | Class for morphological erosion operations with parabolic structuring elements
ParameterFileParser | Implements functionality to read a parameter file
ParameterMapInterface | Implements functionality to get parameters from a parameter map
ParzenWindowHistogramImageToImageMetric | A base class for image metrics based on a joint histogram computed using Parzen Windowing
ParzenWindowHistogramGetValueAndDerivativePerThreadStruct |
ParzenWindowHistogramMultiThreaderParameterType |
ParzenWindowMutualInformationImageToImageMetric | Computes the mutual information between two images to be registered using the method of Mattes et al
ParzenWindowMutualInformationMultiThreaderParameterType |
ParzenWindowNormalizedMutualInformationImageToImageMetric | Computes the normalized mutual information between two images to be registered using a method based on Thevenaz&Unser [3]
PatternIntensityImageToImageMetric | Computes similarity between two objects to be registered
PCAMetric |
PCAMetricGetSamplesPerThreadStruct |
PCAMetricMultiThreaderParameterType |
PCAMetric2 |
PreconditionedASGDOptimizer | This class implements a gradient descent optimizer with adaptive gain
QuasiNewtonLBFGSOptimizer | ITK version of the lbfgs algorithm ..
RecursiveBSplineInterpolationWeightFunction | Returns the weights over the support region used for B-spline interpolation/reconstruction
RecursiveBSplineTransform | A recursive implementation of the B-spline transform
RecursiveBSplineTransformImplementation | This helper class contains the actual implementation of the recursive B-spline transform
RecursiveBSplineTransformImplementation< OutputDimension, 0, SplineOrder, TScalar > |
ReducedDimensionBSplineInterpolateImageFunction | Evaluates the B-Spline interpolation of an image. Spline order may be from 0 to 5
RSGDEachParameterApartBaseOptimizer | An optimizer based on gradient descent..
RSGDEachParameterApartOptimizer | An optimizer based on gradient descent
ScaledSingleValuedCostFunction | A cost function that applies a scaling to another cost function
ScaledSingleValuedNonLinearOptimizer |
SingleValuedPointSetToPointSetMetric | Computes similarity between two point sets
StackTransform | Implements stack of transforms: one for every last dimension index
StandardGradientDescentOptimizer | This class implements a gradient descent optimizer with a decaying gain
StandardStochasticGradientOptimizer | This class implements a gradient descent optimizer with a decaying gain
StandardStochasticVarianceReducedGradientOptimizer | This class implements a gradient descent optimizer with a decaying gain
StatisticalShapePointPenalty | Computes the Mahalanobis distance between the transformed shape and a mean shape. A model mean and covariance are required
StochasticGradientDescentOptimizer | Implement a gradient descent optimizer
MultiThreaderParameterType |
StochasticVarianceReducedGradientDescentOptimizer | Implement a gradient descent optimizer
MultiThreaderParameterType |
SumOfPairwiseCorrelationCoefficientsMetric |
SumSquaredTissueVolumeDifferenceImageToImageMetric | Compute sum of square tissue volume difference between two images
ThinPlateR2LogRSplineKernelTransform2 |
ThinPlateSplineKernelTransform2 |
TransformBendingEnergyPenaltyTerm | A cost function that calculates the bending energy of a transformation
TransformIOFactoryRegisterManager |
TransformixFilter |
TransformixInputPointFileReader | A reader that understands transformix input point files
TransformPenaltyTerm | A cost function that calculates a penalty term on a transformation
TransformRigidityPenaltyTerm | A cost function that calculates a rigidity penalty term
TransformToDeterminantOfSpatialJacobianSource | Generate the spatial Jacobian from a coordinate transform
TransformToSpatialJacobianSource | Generate the spatial Jacobian matrix from a coordinate transform
TranslationStackTransform |
TranslationTransformInitializer | TranslationTransformInitializer is a helper class intended to initialize the translation of a TranslationTransforms
UpsampleBSplineParametersFilter | Convenience class for upsampling a B-spline coefficient image
VarianceOverLastDimensionImageMetric | Compute the sum of variances over the slowest varying dimension in the moving image
VectorContainerSource | A base class for creating an ImageToVectorContainerFilter
VectorDataContainer | Define a front-end to the STL "vector" container that conforms to the IndexedContainerInterface
VectorMeanDiffusionImageFilter | Applies an averaging filter to an image
VolumeSplineKernelTransform2 |
WeightedCombinationTransform | Implements a weighted linear combination of multiple transforms
transformix |
TRANSFORMIX |
AffineTransform |
ANNbd_tree |
ANNbruteForce |
ANNkd_tree |
ANNpointSet |
BSplineTransform |
CompositeTransform |
DistancePreservingRigidityPenalty | A penalty term designed to preserve inter-voxel distances within rigid body regions
ElastixRegistrationMethod | ITK Filter interface to the Elastix registration library
Euler2DTransform |
Euler3DTransform |
GPUAdvancedCombinationTransformFactory | Object Factory implementation for GPUAdvancedCombinationTransform
GPUAdvancedEuler2DTransformFactory | Object Factory implementation for GPUAdvancedEuler2DTransform
GPUAdvancedEuler3DTransformFactory | Object Factory implementation for GPUAdvancedEuler3DTransform
GPUAdvancedMatrixOffsetTransformBaseFactory | Object Factory implementation for GPUAdvancedMatrixOffsetTransformBase
GPUAdvancedSimilarity2DTransformFactory | Object Factory implementation for GPUAdvancedSimilarity2DTransform
GPUAdvancedSimilarity3DTransformFactory | Object Factory implementation for GPUAdvancedSimilarity3DTransform
GPUAdvancedTranslationTransformFactory | Object Factory implementation for GPUAdvancedTranslationTransform
GPUAffineTransformFactory | Object Factory implementation for GPUAffineTransform
GPUBSplineTransformFactory | Object Factory implementation for GPUBSplineTransform
GPUCompositeTransformBaseBase | Base class for all GPU composite transforms
GPUCompositeTransformFactory | Object Factory implementation for GPUCompositeTransform
GPUEuler2DTransformFactory | Object Factory implementation for GPUEuler2DTransform
GPUEuler3DTransformFactory | Object Factory implementation for GPUEuler3DTransform
GPUIdentityTransformFactory | Object Factory implementation for GPUIdentityTransform
GPUImageBase | GPU version of ImageBase
GPUImageFunction | GPU version of ImageFunction
GPUSimilarity2DTransformFactory | Object Factory implementation for GPUSimilarity2DTransform
GPUSimilarity3DTransformFactory | Object Factory implementation for GPUSimilarity3DTransform
GPUTranslationTransformFactory | Object Factory implementation for GPUTranslationTransform
IdentityTransform |
ImageFileWriter |
ImageIOBase |
ImageSink |
LoggerBase |
ResampleBase | This class is the elastix base class for all Resamplers
Similarity2DTransform |
Similarity3DTransform |
SingleValuedNonLinearOptimizer |
TAnyITKTransform |
TObject |
TransformixFilter | ITK Filter interface to the Transformix library
TranslationStackTransform | A Translation transform based on the itkStackTransform
TranslationTransform |

Generated on 1768596610 for elastix by 1.15.0 |