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GenericFile.h
// Copyright (C) 2003-2011 Johan Hoffman and Anders Logg
//
// This file is part of DOLFIN.
//
// DOLFIN is free software: you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
//
// DOLFIN is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with DOLFIN. If not, see <http://www.gnu.org/licenses/>.
//
// Modified by Ola Skavhaug 2009.
#ifndef __GENERIC_FILE_H
#define __GENERIC_FILE_H
#include <map>
#include <string>
#include <utility>
#include <vector>
namespace dolfin
{
class GenericDofMap;
class Function;
class GenericMatrix;
class GenericVector;
class LocalMeshData;
class Mesh;
template <typename T> class MeshFunction;
template <typename T> class MeshValueCollection;
class Parameters;
class Table;
class GenericFile
{
public:
GenericFile(std::string filename,
std::string filetype);
virtual ~GenericFile();
// Input
virtual void read(Mesh& mesh);
virtual void read(GenericVector& x);
virtual void read(GenericMatrix& A);
virtual void read(GenericDofMap& dofmap);
virtual void read(LocalMeshData& data);
virtual void read(MeshFunction<int>& mesh_function);
virtual void read(MeshFunction<std::size_t>& mesh_function);
virtual void read(MeshFunction<double>& mesh_function);
virtual void read(MeshFunction<bool>& mesh_function);
virtual void read(MeshValueCollection<int>& mesh_markers);
virtual void read(MeshValueCollection<std::size_t>& mesh_markers);
virtual void read(MeshValueCollection<double>& mesh_markers);
virtual void read(MeshValueCollection<bool>& mesh_markers);
virtual void read(Parameters& parameters);
virtual void read(Table& table);
virtual void read(std::vector<int>& x);
virtual void read(std::vector<std::size_t>& x);
virtual void read(std::vector<double>& x);
virtual void read(std::map<std::size_t, int>& map);
virtual void read(std::map<std::size_t, std::size_t>& map);
virtual void read(std::map<std::size_t, double>& map);
virtual void read(std::map<std::size_t, std::vector<int>>& array_map);
virtual void read(std::map<std::size_t, std::vector<std::size_t>>& array_map);
virtual void read(std::map<std::size_t, std::vector<double>>& array_map);
virtual void read(Function& u);
// Output
virtual void write(const GenericVector& x);
virtual void write(const GenericMatrix& A);
virtual void write(const Mesh& mesh);
virtual void write(const GenericDofMap& dofmap);
virtual void write(const LocalMeshData& data);
virtual void write(const MeshFunction<int>& mesh_function);
virtual void write(const MeshFunction<std::size_t>& mesh_function);
virtual void write(const MeshFunction<double>& mesh_function);
virtual void write(const MeshFunction<bool>& mesh_function);
virtual void write(const MeshValueCollection<int>& mesh_markers);
virtual void write(const MeshValueCollection<std::size_t>& mesh_markers);
virtual void write(const MeshValueCollection<double>& mesh_markers);
virtual void write(const MeshValueCollection<bool>& mesh_markers);
virtual void write(const Function& u);
// Output with time
virtual void write(const Mesh& mesh, double time);
virtual void write(const MeshFunction<int>& mf, double time);
virtual void write(const MeshFunction<std::size_t>& mf, double time);
virtual void write(const MeshFunction<double>& mf, double time);
virtual void write(const MeshFunction<bool>& mf, double time);
virtual void write(const Function& u, double time);
virtual void write(const Parameters& parameters);
virtual void write(const Table& table);
virtual void write(const std::vector<int>& x);
virtual void write(const std::vector<std::size_t>& x);
virtual void write(const std::vector<double>& x);
virtual void write(const std::map<std::size_t, int>& map);
virtual void write(const std::map<std::size_t, std::size_t>& map);
virtual void write(const std::map<std::size_t, double>& map);
virtual void write(const std::map<std::size_t, std::vector<int>>& array_map);
virtual void write(const std::map<std::size_t,
std::vector<std::size_t>>& array_map);
virtual void write(const std::map<std::size_t,
std::vector<double>>& array_map);
void _read();
void _write(std::size_t process_number);
// Return filename
std::string name() const
{ return _filename; }
protected:
void read_not_impl(const std::string object) const;
void write_not_impl(const std::string object) const;
std::string _filename;
std::string _filetype;
bool opened_read;
bool opened_write;
// True if we have written a header
bool check_header;
// Counters for the number of times various data has been written
std::size_t counter;
std::size_t counter1;
std::size_t counter2;
};
}
#endif
dolfin::Function
Definition Function.h:66
dolfin::GenericDofMap
This class provides a generic interface for dof maps.
Definition GenericDofMap.h:50
dolfin::GenericFile::~GenericFile
virtual ~GenericFile()
Destructor.
Definition GenericFile.cpp:41
dolfin::GenericFile::GenericFile
GenericFile(std::string filename, std::string filetype)
Constructor.
Definition GenericFile.cpp:33
dolfin::GenericMatrix
This class defines a common interface for matrices.
Definition GenericMatrix.h:47
dolfin::GenericVector
This class defines a common interface for vectors.
Definition GenericVector.h:48
dolfin::LocalMeshData
This class stores mesh data on a local processor corresponding to a portion of a (larger) global mesh...
Definition LocalMeshData.h:59
dolfin::MeshFunction
Definition MeshFunction.h:58
dolfin::MeshValueCollection
Definition MeshValueCollection.h:51
dolfin::Mesh
Definition Mesh.h:84
dolfin::Parameters
Definition Parameters.h:95
dolfin::Table
Definition Table.h:50
dolfin
Definition adapt.h:30
dolfin::time
double time()
Return wall time elapsed since some implementation dependent epoch.
Definition timing.cpp:48
dolfin::parameters
GlobalParameters parameters
The global parameter database.
Definition GlobalParameters.cpp:32