!LAUNCH: crac -i ${abs_top_builddir:-../..}/test_f/bug/bug-15649-genome-2 -r bug-15649-read.fa --detailed-sam -k 22 -o ${abs_top_builddir:-../..}/test_f/bug/bug-15649-2.sam
!OUTPUT_FILE: ${abs_top_builddir:-../..}/test_f/bug/bug-15649-2.sam
!OUTPUT_DIR: ${abs_top_builddir:-../..}/test_f/bug

$ Bug 15649-2: affectation was not made to chr4 (genome with only one chromosome)
1:^chr4.*\\s+4\\s+1\\s+[0-9]+\\s+23M\\s+.*XO:Z:4|1,0\\s+
