Package: concavity
Version: 0.1+dfsg.1-6build1
Architecture: amd64
Architecture-Variant: amd64v3
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 734
Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5)
Suggests: conservation-code, pymol
Section: science
Priority: optional
Homepage: https://compbio.cs.princeton.edu/concavity/
Description: predictor of protein ligand binding sites from structure and conservation
 ConCavity predicts protein ligand binding sites by combining evolutionary
 sequence conservation and 3D structure.
 .
 ConCavity takes as input a PDB format protein structure and optionally
 files that characterize the evolutionary sequence conservation of the chains
 in the structure file.
 .
 The following result files are produced by default:
  * Residue ligand binding predictions for each chain (*.scores).
  * Residue ligand binding predictions in a PDB format file (residue
    scores placed in the temp. factor field, *_residue.pdb).
  * Pocket prediction locations in a DX format file (*.dx).
  * PyMOL script to visualize the predictions (*.pml).
