Package: cnvkit
Version: 0.9.12-1build1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 94677
Depends: python3-biopython, python3-matplotlib, python3-numpy, python3-pandas, python3-pomegranate (>= 0.15), python3-pyfaidx, python3-pysam, python3-reportlab, python3-scipy, python3-sklearn, python3:any, r-bioc-dnacopy
Section: science
Priority: optional
Homepage: https://cnvkit.readthedocs.org
Description: Copy number variant detection from targeted DNA sequencing
 A command-line toolkit and Python library for detecting copy number variants
 and alterations genome-wide from targeted DNA sequencing. It is designed for
 use with hybrid capture, including both whole-exome and custom target panels,
 and short-read sequencing platforms such as Illumina and Ion Torrent.
