Package: brig
Version: 0.95+dfsg-3
Architecture: arm64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 412
Depends: default-jre | java6-runtime | java7-runtime | java8-runtime | java9-runtime | java10-runtime | java11-runtime, jarwrapper (>= 0.5), cgview, libjdom1-java, libswing-layout-java
Section: science
Priority: optional
Homepage: http://sourceforge.net/projects/brig/
Description: BLAST Ring Image Generator
 BRIG can display circular comparisons between a large number of genomes,
 with a focus on handling genome assembly data.
  * Images show similarity between a central reference sequence and other
    sequences as concentric rings.
  * BRIG will perform all BLAST comparisons and file parsing automatically
    via a simple GUI.
  * Contig boundaries and read coverage can be displayed for draft genomes;
    customized graphs and annotations can be displayed.
  * Using a user-defined set of genes as input, BRIG can display gene
    presence, absence, truncation or sequence variation in a set of
    complete genomes, draft genomes or even raw, unassembled sequence data.
  * BRIG also accepts SAM-formatted read-mapping files enabling genomic
    regions present in unassembled sequence data from multiple samples to
    be compared simultaneously
