Package: bifrost
Version: 1.3.5-1
Architecture: arm64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1044
Depends: libbifrost0 (>= 1.3.5), libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4)
Section: python
Priority: optional
Homepage: https://github.com/pmelsted/bifrost
Description: parallel construction, indexing and querying of de Bruijn graphs
 Bifrost is a command-line tool for sequencing that features a broad
 range of functions, such as indexing, editing, and querying the graph,
 and includes a graph coloring method that maps each k-mer of the graph
 to the genomes it occurs in.
 .
  * Build, index, color and query the compacted de Bruijn graph
  * No need to build the uncompacted de Bruijn graph
  * Reads or assembled genomes as input
  * Output graph in GFA (can be visualized with Bandage), FASTA or binary
  * Graph cleaning: short tip clipping, etc.
  * Multi-threaded
  * No parameters to estimate with other tools
  * Exact or approximate k-mer search of queries
