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BamTools::BamMultiReader Member List

This is the complete list of members for BamTools::BamMultiReader, including all inherited members.

BamMultiReader() | BamTools::BamMultiReader |
Close() | BamTools::BamMultiReader |
CloseFile(const std::string &filename) | BamTools::BamMultiReader |
CreateIndexes(const BamIndex::IndexType &type=BamIndex::STANDARD) | BamTools::BamMultiReader |
Filenames() const | BamTools::BamMultiReader |
GetErrorString() const | BamTools::BamMultiReader |
GetHeader() const | BamTools::BamMultiReader |
GetHeaderText() const | BamTools::BamMultiReader |
GetMergeOrder() const | BamTools::BamMultiReader |
GetNextAlignment(BamAlignment &alignment) | BamTools::BamMultiReader |
GetNextAlignmentCore(BamAlignment &alignment) | BamTools::BamMultiReader |
GetReferenceCount() const | BamTools::BamMultiReader |
GetReferenceData() const | BamTools::BamMultiReader |
GetReferenceID(const std::string &refName) const | BamTools::BamMultiReader |
HasIndexes() const | BamTools::BamMultiReader |
HasOpenReaders() const | BamTools::BamMultiReader |
Jump(int refID, int position=0) | BamTools::BamMultiReader |
LocateIndexes(const BamIndex::IndexType &preferredType=BamIndex::STANDARD) | BamTools::BamMultiReader |
MergeByCoordinate enum value | BamTools::BamMultiReader |
MergeByName enum value | BamTools::BamMultiReader |
MergeOrder enum name | BamTools::BamMultiReader |
Open(const std::vector< std::string > &filenames) | BamTools::BamMultiReader |
OpenFile(const std::string &filename) | BamTools::BamMultiReader |
OpenIndexes(const std::vector< std::string > &indexFilenames) | BamTools::BamMultiReader |
Rewind() | BamTools::BamMultiReader |
RoundRobinMerge enum value | BamTools::BamMultiReader |
SetExplicitMergeOrder(BamMultiReader::MergeOrder order) | BamTools::BamMultiReader |
SetRegion(const BamRegion &region) | BamTools::BamMultiReader |
SetRegion(const int &leftRefID, const int &leftPosition, const int &rightRefID, const int &rightPosition) | BamTools::BamMultiReader |
~BamMultiReader() | BamTools::BamMultiReader |