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Here is a list of all variables with links to the classes they belong to:

### - a -

- AlignedBases : BamTools::BamAlignment
- AlignmentFlag : BamTools::BamAlignment
- AssemblyID : BamTools::SamSequence

### - b -

- Bin : BamTools::BamAlignment

### - c -

- Checksum : BamTools::SamSequence
- CigarData : BamTools::BamAlignment
- CommandLine : BamTools::SamProgram
- Comments : BamTools::SamHeader
- CustomTags : BamTools::SamHeader, BamTools::SamProgram, BamTools::SamReadGroup, BamTools::SamSequence

### - d -

- Description : BamTools::SamReadGroup

### - f -

- Filename : BamTools::BamAlignment
- FlowOrder : BamTools::SamReadGroup

### - g -

- GroupOrder : BamTools::SamHeader

### - i -

- ID : BamTools::SamProgram, BamTools::SamReadGroup
- InsertSize : BamTools::BamAlignment

### - k -

- KeySequence : BamTools::SamReadGroup

### - l -

- LeftPosition : BamTools::BamRegion
- LeftRefID : BamTools::BamRegion
- Length : BamTools::BamAlignment, BamTools::CigarOp, BamTools::SamSequence
- Library : BamTools::SamReadGroup

### - m -

- m_errorString : BamTools::IBamIODevice
- m_mode : BamTools::IBamIODevice
- MapQuality : BamTools::BamAlignment
- MatePosition : BamTools::BamAlignment
- MateRefID : BamTools::BamAlignment

### - n -

- Name : BamTools::BamAlignment, BamTools::SamProgram, BamTools::SamSequence

### - p -

- PlatformUnit : BamTools::SamReadGroup
- Position : BamTools::BamAlignment
- PredictedInsertSize : BamTools::SamReadGroup
- PreviousProgramID : BamTools::SamProgram
- ProductionDate : BamTools::SamReadGroup
- Program : BamTools::SamReadGroup
- Programs : BamTools::SamHeader

### - q -

- Qualities : BamTools::BamAlignment
- QueryBases : BamTools::BamAlignment

### - r -

- ReadGroups : BamTools::SamHeader
- RefID : BamTools::BamAlignment
- RefLength : BamTools::RefData
- RefName : BamTools::RefData
- RightPosition : BamTools::BamRegion
- RightRefID : BamTools::BamRegion

### - s -

- Sample : BamTools::SamReadGroup
- Sequences : BamTools::SamHeader
- SequencingCenter : BamTools::SamReadGroup
- SequencingTechnology : BamTools::SamReadGroup
- SortOrder : BamTools::SamHeader
- Species : BamTools::SamSequence

### - t -

- TagData : BamTools::BamAlignment
- TagName : BamTools::CustomHeaderTag
- TagValue : BamTools::CustomHeaderTag
- Type : BamTools::CigarOp

### - u -

- URI : BamTools::SamSequence

### - v -

- Version : BamTools::SamHeader, BamTools::SamProgram