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BALL::DNAMutator Member List

This is the complete list of members for BALL::DNAMutator, including all inherited members.

addMutation(Index i, const String &new_frag_name) | BALL::DNAMutator | virtual
clearMutations() | BALL::DNAMutator | virtual
db_ | BALL::Mutator | protected
DNAMutator(EnergyMinimizer *mini=NULL, ForceField *ff=NULL, FragmentDB *frag=NULL) | BALL::DNAMutator |
MATCH_TORSION enum value | BALL::DNAMutator |
MatchingMode enum name | BALL::DNAMutator |
MINIMUM_ANGLE enum value | BALL::DNAMutator |
mutate(MutatorOptions opts=NONE) | BALL::Mutator |
mutate_impl_(MutatorOptions opt) | BALL::DNAMutator | protected virtual
Mutator(FragmentDB *db=0) | BALL::Mutator |
MutatorOptions enum name | BALL::Mutator |
NONE enum value | BALL::Mutator |
OPTIMIZE enum value | BALL::Mutator |
optimize() | BALL::DNAMutator | virtual
setFirstStrand(Chain *s1) | BALL::DNAMutator |
setForceField(ForceField *ff) | BALL::DNAMutator |
setFragmentDB(FragmentDB *db) | BALL::Mutator |
setMatchingMode(MatchingMode mmode) | BALL::DNAMutator |
setMaxOptimizationSteps(Size steps) | BALL::DNAMutator |
setMinimizer(EnergyMinimizer *mini) | BALL::DNAMutator |
setNucleotideMapping(const NucleotideMapping &bij) | BALL::DNAMutator |
setSecondStrand(Chain *s2) | BALL::DNAMutator |
setStrands(Chain *s1, Chain *s2) | BALL::DNAMutator |
setup() | BALL::DNAMutator | virtual
setUsedProperty(Property p) | BALL::DNAMutator |
~DNAMutator() | BALL::DNAMutator |
~Mutator() | BALL::Mutator | virtual