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BALL::GAFFTypeProcessor Member List

This is the complete list of members for BALL::GAFFTypeProcessor, including all inherited members.

annotateAliphaticAndAromaticRingAtoms_() | BALL::GAFFTypeProcessor | protected
annotateBondTypes_() | BALL::GAFFTypeProcessor | protected
annotatePlanarRingAtoms_() | BALL::GAFFTypeProcessor | protected
annotateRingSizes_() | BALL::GAFFTypeProcessor | protected
argument_pointer typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
argument_reference typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
argument_type typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
assignAtomtype_(Atom &atom) | BALL::GAFFTypeProcessor | protected
atom_types_ | BALL::GAFFTypeProcessor | protected
ces_parsers_ | BALL::GAFFTypeProcessor | protected
const_argument_pointer typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
const_argument_reference typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
current_molecule_ | BALL::GAFFTypeProcessor | protected
finish() | BALL::UnaryProcessor< Composite > | inline virtual
GAFFTypeProcessor() | BALL::GAFFTypeProcessor |
GAFFTypeProcessor(const Options &new_options) | BALL::GAFFTypeProcessor |
getCarbonTypes_() | BALL::GAFFTypeProcessor | inline protected
getHydrogenTypes_() | BALL::GAFFTypeProcessor | inline protected
getNitrogenTypes_() | BALL::GAFFTypeProcessor | inline protected
getOxygenTypes_() | BALL::GAFFTypeProcessor | inline protected
getSulfurTypes_() | BALL::GAFFTypeProcessor | inline protected
getTypeNames() const | BALL::GAFFTypeProcessor |
operator()(Composite &composite) | BALL::GAFFTypeProcessor | virtual
options | BALL::GAFFTypeProcessor |
parseAtomtypeTableFile_() | BALL::GAFFTypeProcessor | protected
planarAtom_(const Atom &atom) | BALL::GAFFTypeProcessor | protected
postProcessAtomTypes_(Molecule *molecule) | BALL::GAFFTypeProcessor | protected
precomputeAtomProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | protected
precomputeBondProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | protected
result_type typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
sssr_ | BALL::GAFFTypeProcessor | protected
start() | BALL::UnaryProcessor< Composite > | inline virtual
UnaryProcessor() | BALL::UnaryProcessor< Composite > | inline
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | inline
~GAFFTypeProcessor() | BALL::GAFFTypeProcessor | virtual
~UnaryProcessor() | BALL::UnaryProcessor< Composite > | inline virtual