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Here is a list of all functions with links to the classes they belong to:

### - c -

- c_str() : BALL::String, BALL::Substring
- calcConjugate_() : BALL::GeometricFit
- calculate() : BALL::DockProblem, BALL::FermiBaseFunction, BALL::GeneticAlgorithm, BALL::GridAnalysis, BALL::LinearBaseFunction, BALL::LogP, BALL::ScoringBaseFunction, BALL::VIEW::FDPBDialog
- calculate_() : BALL::ConnectivityBase, BALL::Descriptor, BALL::PartialChargeBase, BALL::SimpleBase, BALL::SurfaceBase, BALL::VIEW::FDPBDialog
- calculateAbsoluteCoordinates() : BALL::VIEW::Stage
- calculateAromaticSystems_() : BALL::Kekuliser
- calculateBALLDescriptors() : BALL::QSAR::QSARData
- calculateBendEmpiricalForceConstant() : BALL::MMFF94StretchBend
- calculateBendEmpiricalReferenceAngle() : BALL::MMFF94StretchBend
- calculateCoefficientStdErrors() : BALL::QSAR::RegressionValidation
- calculateComplementaryBases_() : BALL::VIEW::AddCartoonModel
- calculateConstraintsScore() : BALL::ScoringFunction
- calculateDefaultBijection() : BALL::StructureMapper
- calculateDielectricConstant() : BALL::AdvancedElectrostatic
- calculateDistances() : BALL::VIEW::AtomDistanceColorProcessor
- calculateDistanceScores_() : BALL::Kekuliser
- calculateEigenvectors() : BALL::QSAR::PCRModel
- calculateEnergy() : BALL::GeneralizedBornModel
- calculateEuclDistanceMatrix() : BALL::QSAR::ALLModel
- calculateFactors() : BALL::MicroCanonicalMD
- calculateFactors_() : BALL::CanonicalMD
- calculateFDPB() : BALL::VIEW::MolecularStructure
- CalculateFDPBThread() : BALL::VIEW::CalculateFDPBThread
- calculateForceFieldEnergy() : BALL::VIEW::MolecularStructure
- calculateFragmentBijection() : BALL::StructureMapper
- calculateGeometricalCenter() : BALL::ScoringFunction
- calculateGridScore() : BALL::GridBasedScoring
- calculateGuidePoints_() : BALL::VIEW::AddBackboneModel
- calculateHBonds() : BALL::VIEW::MolecularStructure
- calculateHeuristic_() : BALL::MMFF94Torsion
- calculateIncludedVertices_() : BALL::VIEW::ModifyRepresentationDialog
- calculateKernelMatrix() : BALL::QSAR::Kernel
- calculateKernelMatrix1() : BALL::QSAR::Kernel
- calculateKernelMatrix2() : BALL::QSAR::Kernel
- calculateKernelMatrix3() : BALL::QSAR::Kernel
- calculateKernelMatrix4() : BALL::QSAR::Kernel
- calculateKernelVector() : BALL::QSAR::Kernel
- calculateKineticEnergy_() : BALL::SnapShotManager
- calculateLinePoints_() : BALL::VIEW::FieldLineCreator
- calculateMatrices_() : BALL::CrystalInfo
- calculateMean() : BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- calculateMinSpacing() : BALL::HashGrid3< Item >
- calculateModelParts() : BALL::VIEW::AddBackboneModel, BALL::VIEW::AddCartoonModel
- calculateMoleculeRadius() : BALL::ScoringFunction
- calculateOffsets() : BALL::QSAR::KernelModel, BALL::QSAR::LinearModel, BALL::QSAR::NonLinearModel, BALL::QSAR::RegressionModel
- calculatePEOE() : BALL::PartialChargeProcessor
- calculatePotential() : BALL::GeneralizedBornModel
- calculateProbabilities() : BALL::QSAR::BayesModel, BALL::QSAR::NBModel, BALL::QSAR::SNBModel
- calculateQuality() : BALL::Rescoring
- calculateRamachandranPlot() : BALL::VIEW::MolecularStructure
- calculateRankCorrelation() : BALL::QSAR::Statistics
- calculateReactionFieldEnergy() : BALL::FDPB
- calculateRelativeCoordinates() : BALL::VIEW::Stage
- calculateRibbonEllipse_() : BALL::VIEW::AddBackboneModel
- calculateRibbonPoints_() : BALL::VIEW::AddBackboneModel
- calculateRMSD() : BALL::AtomBijection, BALL::DockingAlgorithm, BALL::StructureMapper, BALL::VIEW::MolecularStructure
- calculateSBTIJK() : BALL::MMFF94StretchBend
- calculateScore() : BALL::Constraint, BALL::PharmacophoreConstraint, BALL::ReferenceArea, BALL::ScoringFunction
- calculateSD() : BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- calculateSecondaryStructure() : BALL::VIEW::MolecularStructure
- calculateSelectionMedoid() : BALL::BinaryFingerprintMethods
- calculateSimilarity() : BALL::MolecularSimilarity
- calculateSolvationEnergy() : BALL::GeneralizedBornModel
- calculateSSSR() : BALL::RingPerceptionProcessor
- calculateStaticLigandFragmentEnergy() : BALL::ScoringFunction
- calculateStdErr() : BALL::QSAR::GPModel, BALL::QSAR::Model
- calculateStretchConstant() : BALL::MMFF94StretchBend
- calculateStretchR0() : BALL::MMFF94StretchBend
- calculateTopologicalDescriptors() : BALL::QSAR::QSARData
- calculateTransformation() : BALL::StructureMapper
- calculateTubePoints_() : BALL::VIEW::AddBackboneModel
- calculateVectors_() : BALL::VIEW::Camera
- calculateWeightedKernelMatrix() : BALL::QSAR::Kernel
- calculateWeights() : BALL::QSAR::ALLModel, BALL::QSAR::KNNModel
- calculateXX() : BALL::QSAR::ALLModel
- calculateXY() : BALL::QSAR::ALLModel
- Camera() : BALL::VIEW::Camera
- canBeCopied() : BALL::TriangulatedSurface
- cancelPressed() : BALL::VIEW::DockDialog, BALL::VIEW::SnapshotVisualisationDialog
- canHandle() : BALL::PluginHandler, BALL::VIEW::DatasetControl, BALL::VIEW::InputDevPluginHandler, BALL::VIEW::ModularWidget, BALL::VIEW::ModularWidgetPluginHandler, BALL::VIEW::MolecularFileDialog, BALL::VIEW::PluginDialog, BALL::VIEW::PyWidget, BALL::VIEW::TestFramework
- CannotWrite() : BALL::File::CannotWrite
- CanonicalMD() : BALL::CanonicalMD
- canonizePath() : BALL::FileSystem
- canUseMeshShortcut_() : BALL::VIEW::ChainColorProcessor, BALL::VIEW::ColorProcessor, BALL::VIEW::CustomColorProcessor, BALL::VIEW::MoleculeColorProcessor, BALL::VIEW::ResidueNameColorProcessor, BALL::VIEW::ResidueNumberColorProcessor
- capacity() : BALL::PDBRecords, BALL::String
- cappingEnabled() : BALL::VIEW::ClippingPlane
- captureCamera() : BALL::VIEW::Scene
- carlsonEllipticalIntegral1_() : BALL::JohnsonBoveyShiftProcessor
- carlsonEllipticalIntegral2_() : BALL::JohnsonBoveyShiftProcessor
- cartoonDNABaseRadiusChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonDNAHelixRadiusChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonDNALadderRadiusChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonHelixRadiusChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonStrandArrowWidthChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonStrandHeightChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonStrandWidthChanged() : BALL::VIEW::ModelSettingsDialog
- cartoonTubeRadiusChanged() : BALL::VIEW::ModelSettingsDialog
- cbegin() : BALL::String
- CCP4File() : BALL::CCP4File
- cend() : BALL::String
- centerCamera() : BALL::VIEW::MolecularControl, BALL::VIEW::MolecularStructure
- centerData() : BALL::QSAR::QSARData
- centering() : BALL::QSAR::Statistics
- certificateError() : BALL::VIEW::HTMLPage
- CESelementConnectionPredicate() : BALL::GAFFCESParser::CESelementConnectionPredicate
- CESelementPredicate() : BALL::GAFFCESParser::CESelementPredicate
- CESPredicate() : BALL::GAFFCESParser::CESPredicate
- CESwildcardsConnectionPredicate() : BALL::GAFFCESParser::CESwildcardsConnectionPredicate
- CESwildcardsPredicate() : BALL::GAFFCESParser::CESwildcardsPredicate
- Chain() : BALL::Chain
- ChainColorProcessor() : BALL::VIEW::ChainColorProcessor
- ChainIteratorTraits() : BALL::ChainIteratorTraits
- changeAllXToY_() : BALL::SecondaryStructureProcessor
- changeAtomElementTriggered_() : BALL::VIEW::EditMode
- changeBondOrder() : BALL::VIEW::Scene
- changeBondOrder_() : BALL::VIEW::EditMode
- changedEditThreshold() : BALL::VIEW::RaytraceableContourSurfaceDialog
- changedNAMode_() : BALL::VIEW::ModelSettingsDialog
- changedRangeMax() : BALL::VIEW::RaytraceableContourSurfaceDialog
- changedRangeMin() : BALL::VIEW::RaytraceableContourSurfaceDialog
- changedRangeSteps() : BALL::VIEW::RaytraceableContourSurfaceDialog
- changeDrawingMode_() : BALL::VIEW::ModifyRepresentationDialog
- changeDrawingModeTransparencyChanged() : BALL::VIEW::ModifyRepresentationDialog
- changedSliderThreshold() : BALL::VIEW::RaytraceableContourSurfaceDialog
- changeLock() : BALL::VIEW::ServerWidget
- changeMode_() : BALL::VIEW::EditSingleShortcut
- changeProteinOrientation_() : BALL::GeometricFit
- changeRotamer_() : BALL::VIEW::MolecularControl
- changeShortcut() : BALL::VIEW::ShortcutRegistry
- changeToUserHomeDir() : BALL::Directory
- ChannelFormat() : BALL::VIEW::ChannelFormat
- ChargeRuleProcessor() : BALL::ChargeRuleProcessor
- CharmmBend() : BALL::CharmmBend
- CharmmConfigurationDialog() : BALL::VIEW::CharmmConfigurationDialog
- CharmmEEF1() : BALL::CharmmEEF1
- CharmmFF() : BALL::CharmmFF
- CharmmImproperTorsion() : BALL::CharmmImproperTorsion
- CharmmNonBonded() : BALL::CharmmNonBonded
- CharmmStretch() : BALL::CharmmStretch
- CharmmTorsion() : BALL::CharmmTorsion
- check() : BALL::Result::ResultData, BALL::SolventExcludedSurface
- checkActivityIDs() : BALL::QSAR::QSARData
- checkApplyButton_() : BALL::VIEW::GridVisualizationDialog, BALL::VIEW::ModifyRepresentationDialog
- checkAtomPositions() : BALL::ResidueChecker
- checkAtomType() : BALL::MMFF94
- checkCharge() : BALL::ResidueChecker
- checkCompatibility() : BALL::FlexibleMolecule
- checkCompleteness() : BALL::ResidueChecker
- checkDrawingPrecision_() : BALL::VIEW::DisplayProperties
- checkForAtomOverlaps() : BALL::ScoringFunction
- checkforDiscreteY() : BALL::QSAR::QSARData
- checkForIncompatibleDrivers_() : BALL::VIEW::HTMLViewDock
- checkGAFFProperties() : BALL::GAFFCESParser::APSMatcher
- checkGL() : BALL::VIEW::GLRenderWindow
- checkHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkID() : BALL::Conformation
- checkInclude_() : BALL::VIEW::ModifyRepresentationDialog
- checkLoop() : BALL::VIEW::SnapshotVisualisationDialog
- checkMenu() : BALL::VIEW::DatasetControl, BALL::VIEW::DatasetController, BALL::VIEW::DisplayProperties, BALL::VIEW::DockingController, BALL::VIEW::DownloadElectronDensity, BALL::VIEW::DownloadPDBFile, BALL::VIEW::FileObserver, BALL::VIEW::GeometricControl, BALL::VIEW::LabelDialog, BALL::VIEW::ModularWidget, BALL::VIEW::MolecularControl, BALL::VIEW::MolecularFileDialog, BALL::VIEW::MolecularStructure, BALL::VIEW::PubChemDialog, BALL::VIEW::PyWidget, BALL::VIEW::Scene, BALL::VIEW::TestFramework, BALL::VIEW::UndoManagerDialog
- checkMenus() : BALL::VIEW::MainControl
- checkName() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkNoLoop() : BALL::VIEW::SnapshotVisualisationDialog
- checkObjectHeader() : BALL::PersistenceManager
- checkObjectPointerArrayHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkObjectPointerArrayTrailer() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkObjectPointerHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkObjectReferenceHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkObjectTrailer() : BALL::PersistenceManager
- checkOverlap_() : BALL::SDGenerator
- checkPrimitiveHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkPrimitiveTrailer() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkResidue() : BALL::VIEW::MolecularControl, BALL::VIEW::MolecularStructure
- checkRock() : BALL::VIEW::SnapshotVisualisationDialog
- checkStorableHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkStorableTrailer() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkStreamHeader() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkStreamTrailer() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- checkTemplate() : BALL::ResidueChecker
- checkTrailer() : BALL::PersistenceManager, BALL::TextPersistenceManager, BALL::XDRPersistenceManager
- ChemicalUnit() : BALL::NMRStarFile::MolecularSystem::ChemicalUnit
- CHGroup() : BALL::CHPI::CHGroup, BALL::CHPISlick::CHGroup
- ChildCompositeIteratorTraits() : BALL::Composite::ChildCompositeIteratorTraits
- chooseAmberFF() : BALL::VIEW::MolecularStructure
- chooseCharmmFF() : BALL::VIEW::MolecularStructure
- chooseColor() : BALL::VIEW::ColorButton, BALL::VIEW::ContourSurfaceDialog
- chooseDCDFile() : BALL::VIEW::MolecularDynamicsDialog
- chooseFile() : BALL::VIEW::FileObserver
- chooseForceField() : BALL::VIEW::MolecularStructure
- chooseMMFF94() : BALL::VIEW::MolecularStructure
- chooseName_() : BALL::VIEW::PropertyEditor
- choosePressed() : BALL::VIEW::ModifyRepresentationDialog
- chooseSolventFile() : BALL::VIEW::AmberConfigurationDialog, BALL::VIEW::CharmmConfigurationDialog, BALL::VIEW::MMFF94ConfigurationDialog
- CHPI() : BALL::CHPI
- CHPISlick() : BALL::CHPISlick
- CIFFile() : BALL::CIFFile
- ClassificationModel() : BALL::QSAR::ClassificationModel
- ClassificationValidation() : BALL::QSAR::ClassificationValidation
- ClaverieParameter() : BALL::ClaverieParameter
- clean() : BALL::ReducedSurface, BALL::SolventExcludedSurface
- cleanPool() : BALL::GeneticAlgorithm
- cleanUp() : BALL::GeneticAlgorithm
- clear() : BALL::AmberFF, BALL::AmberNonBonded, BALL::AmiraMeshFile, BALL::AromaticRingStacking, BALL::AssignBondOrderProcessor, BALL::AStarBondOrderStrategy, BALL::Atom, BALL::AtomContainer, BALL::AtomTypes, BALL::Bit, BALL::BitVector, BALL::Bond, BALL::BondOrderAssignment, BALL::BondOrderAssignmentStrategy, BALL::BranchAndBoundBondOrderStrategy, BALL::BuriedPolar, BALL::CCP4File, BALL::CharmmEEF1, BALL::CharmmFF, BALL::CharmmNonBonded, BALL::CHPI, BALL::CHPISlick, BALL::CIFFile::Datablock, BALL::CIFFile::Item, BALL::CIFFile::SaveFrame, BALL::ClaverieParameter, BALL::Client, BALL::ComposedEnergyProcessor, BALL::Composite, BALL::ConnectedComponentsProcessor, BALL::ConnectedToPredicate, BALL::CosineTorsion, BALL::DCDFile, BALL::Directory, BALL::DisulfidBondProcessor, BALL::DSN6File, BALL::Element, BALL::EnergyProcessor, BALL::Expression, BALL::ExpressionParser::SyntaxTree, BALL::ExpressionPredicate, BALL::ExpressionTree, BALL::File, BALL::ForceField, BALL::ForceFieldParameters, BALL::FPTBondOrderStrategy, BALL::FPTBondOrderStrategy::DPBackTracking_, BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_, BALL::GAFFCESParser::CESPredicate, BALL::GeneralizedBornModel, BALL::HashGrid3< Item >, BALL::HashGridBox3< Item >, BALL::HashSet< Key >, BALL::HMOFile, BALL::HydrogenBond, BALL::HydrogenBondSlick, BALL::ILPBondOrderStrategy, BALL::INIFile, BALL::Kekuliser, BALL::KGreedyBondOrderStrategy, BALL::LennardJones, BALL::LineBasedFile, BALL::Lipophilic, BALL::LogStream, BALL::MMFF94, BALL::MMFF94AtomTypeEquivalences, BALL::MMFF94BendParameters, BALL::MMFF94ChargeProcessor, BALL::MMFF94ESParameters, BALL::MMFF94NonBonded, BALL::MMFF94ParametersBase, BALL::MMFF94PlaneParameters, BALL::MMFF94StretchBendParameters, BALL::MMFF94StretchParameters, BALL::MMFF94TorsionParameters, BALL::MMFF94VDWParameters, BALL::MolecularInformation, BALL::MolecularInteractions, BALL::MoleculeObjectCreator, BALL::MOPACOutputFile, BALL::NamedProperty, BALL::NMRStarFile::BALLToBMRBMapper, BALL::NMRStarFile, BALL::NMRStarFile::EntryInformation, BALL::NMRStarFile::MolecularSystem::ChemicalUnit, BALL::NMRStarFile::MolecularSystem, BALL::NMRStarFile::MolecularSystem::RelatedDB, BALL::NMRStarFile::MonomericPolymer, BALL::NMRStarFile::MonomericPolymer::HomologDB, BALL::NMRStarFile::Sample, BALL::NMRStarFile::Sample::Component, BALL::NonpolarSolvation, BALL::NucleicAcid, BALL::Nucleotide, BALL::Object, BALL::ObjectCreator, BALL::Options, BALL::Pair6_12InteractionEnergyProcessor, BALL::Pair6_12RDFIntegrator, BALL::PairExpInteractionEnergyProcessor, BALL::PairExpRDFIntegrator, BALL::Parameters, BALL::ParameterSection, BALL::PartialBondOrderAssignment, BALL::PCMCavFreeEnergyProcessor, BALL::PDB::BookKeeping, BALL::PDB::RecordCON061, BALL::PDB::RecordCON062, BALL::PDB::RecordCON063, BALL::PDB::RecordCON064, BALL::PDB::RecordCON06, BALL::PDB::RecordCONECT, BALL::PDB::RecordHELIX, BALL::PDB::RecordMASTER, BALL::PDB::RecordSEQRES, BALL::PDB::RecordSHEET, BALL::PDB::RecordSSBOND, BALL::PDB::RecordTURN, BALL::PDB::Residue, BALL::PDB::Structure, BALL::PDBAtom, BALL::PDBFile, BALL::PDBInfo, BALL::PDBRecords, BALL::PeriodicBoundary, BALL::PiecewiseFunction, BALL::PiecewisePolynomial, BALL::PierottiCavFreeEnergyProcessor, BALL::PLP, BALL::Polarity, BALL::PolarSolvation, BALL::Potential1210, BALL::PreciseTime, BALL::PropertyManager, BALL::Protein, BALL::PTE_, BALL::QuadraticAngleBend, BALL::QuadraticBondStretch, BALL::QuadraticImproperTorsion, BALL::Quadruple< T1, T2, T3, T4 >, BALL::RadialDistributionFunction, BALL::RDFIntegrator, BALL::RDFParameter, BALL::RDFSection, BALL::ReducedSurface, BALL::RegularExpression, BALL::ReissCavFreeEnergyProcessor, BALL::Residue, BALL::ResidueTorsions, BALL::ResourceEntry, BALL::ResourceFile, BALL::Result, BALL::RingAnalyser, BALL::RombergIntegrator< Function, DataType >, BALL::RotamerLibrary, BALL::RuleEvaluator, BALL::RuleProcessor, BALL::ScoringComponent, BALL::ScoringFunction, BALL::SDGenerator, BALL::SecondaryStructure, BALL::Selectable, BALL::Selector, BALL::ShiftModel1D, BALL::ShiftModel2D, BALL::ShiftModel, BALL::ShiftModule, BALL::SideChainPlacementProcessor, BALL::SLICKEnergy, BALL::SLICKScore, BALL::SmartsMatcher::RecStruct_, BALL::SmartsMatcher::RecStructCore_, BALL::SmartsParser, BALL::SnapShot, BALL::SnapShotManager, BALL::SolventAccessibleSurface, BALL::SolventDescriptor, BALL::SolventExcludedSurface, BALL::SolventParameter, BALL::SpaceGroupParameters, BALL::Spectrum< DataT, PeakT, PositionT >, BALL::String, BALL::Substring, BALL::TAngle< T >, BALL::TBox3< T >, BALL::TCircle3< T >, BALL::TContour< T >, BALL::TContourLine< T >, BALL::TContourSurface< T >, BALL::Templates, BALL::TFFT1D< ComplexTraits >, BALL::TFFT2D< ComplexTraits >, BALL::TFFT3D< ComplexTraits >, BALL::Timer, BALL::TimeStamp, BALL::TLine3< T >, BALL::TMatrix4x4< T >, BALL::TPlane3< T >, BALL::TQuaternion< T >, BALL::TrajectoryFile, BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >, BALL::TriangulatedSurface, BALL::Triple< T1, T2, T3 >, BALL::TRRFile, BALL::TSimpleBox3< T >, BALL::TSphere3< T >, BALL::TSurface< T >, BALL::TVector2< T >, BALL::TVector3< T >, BALL::TVector4< T >, BALL::UhligCavFreeEnergyProcessor, BALL::VanDerWaalsSlick, BALL::VIEW::AddBackboneModel, BALL::VIEW::AddBallAndStickModel, BALL::VIEW::AddSurfaceModel, BALL::VIEW::AtomBondModelBaseProcessor, BALL::VIEW::Box, BALL::VIEW::Camera, BALL::VIEW::ClippingPlane, BALL::VIEW::ColorExtension2, BALL::VIEW::ColorHSV, BALL::VIEW::ColorProcessor, BALL::VIEW::ColorRGBA, BALL::VIEW::ColorUnit, BALL::VIEW::ColorUnitHue, BALL::VIEW::CompositeManager, BALL::VIEW::ConnectionObject, BALL::VIEW::Dataset, BALL::VIEW::Disc, BALL::VIEW::GeometricControl, BALL::VIEW::GeometricObject, BALL::VIEW::GLDisplayList, BALL::VIEW::GLRenderer, BALL::VIEW::HBondModelProcessor, BALL::VIEW::Label, BALL::VIEW::Line, BALL::VIEW::MainControl, BALL::VIEW::Mesh, BALL::VIEW::MeshBuffer, BALL::VIEW::ModelProcessor, BALL::VIEW::ModularWidget, BALL::VIEW::MultiColorExtension, BALL::VIEW::MultiLine, BALL::VIEW::Point, BALL::VIEW::POVRenderer, BALL::VIEW::PyWidget, BALL::VIEW::Renderer, BALL::VIEW::Representation, BALL::VIEW::RepresentationManager, BALL::VIEW::Scene, BALL::VIEW::SDWidget, BALL::VIEW::ServerWidget, BALL::VIEW::ShortcutRegistry, BALL::VIEW::SimpleBox, BALL::VIEW::Sphere, BALL::VIEW::Stage, BALL::VIEW::STLRenderer, BALL::VIEW::Tube, BALL::VIEW::TwoColoredLine, BALL::VIEW::TwoColoredTube, BALL::VIEW::Vertex2, BALL::VIEW::Vertex, BALL::VIEW::VRMLRenderer, BALL::VIEW::XML3DRenderer
- clear_() : BALL::MOL2File, BALL::PoseClustering, BALL::VIEW::AddBackboneModel
- clearAtomGrid() : BALL::VIEW::ColorProcessor
- clearBonds() : BALL::GAMESSLogFile
- clearBuffer() : BALL::SnapShotManager, BALL::VIEW::MeshBuffer
- clearClipboard() : BALL::VIEW::MolecularControl
- clearComposites() : BALL::VIEW::AddSurfaceModel, BALL::VIEW::AtomBondModelBaseProcessor, BALL::VIEW::ModelProcessor
- clearConformations() : BALL::FlexibleMolecule
- clearData() : BALL::ScoreGridSet, BALL::VIEW::MainControl
- clearEntries() : BALL::VIEW::AssignBondOrderResultsDialog, BALL::VIEW::PubChemDialog
- clearFields_() : BALL::VIEW::LightSettings
- clearGeometricObjects() : BALL::VIEW::Representation
- clearHistory_() : BALL::VIEW::PyWidget
- clearKeySequences() : BALL::VIEW::ShortcutRegistry
- clearLastPtr() : BALL::AutoDeletable
- clearLightSources() : BALL::VIEW::Stage
- clearMutations() : BALL::DNAMutator, BALL::Mutator
- clearNames_() : BALL::VIEW::GLRenderer
- clearNormals() : BALL::TSurface< T >
- clearParameters() : BALL::CIFFile, BALL::GAMESSDatFile
- clearProperty() : BALL::PropertyManager
- clearRecordedAnimation() : BALL::VIEW::Scene
- clearScript() : BALL::VIEW::PyWidget
- clearSelection() : BALL::VIEW::MainControl
- clearSelector() : BALL::VIEW::MolecularControl
- ClearShiftProcessor() : BALL::ClearShiftProcessor
- clearStartupScript() : BALL::VIEW::PythonSettings
- clearStatusBarText_() : BALL::VIEW::MainControl
- clearSticks() : BALL::Spectrum< DataT, PeakT, PositionT >
- clearStoredInteractions_() : BALL::ScoringFunction
- clearTriangles() : BALL::TSurface< T >
- clearUsedAtoms_() : BALL::VIEW::AtomBondModelBaseProcessor
- clearVertexBuffersFor() : BALL::VIEW::GLRenderer
- clearVertices() : BALL::TSurface< T >
- clicked() : BALL::VIEW::FDPBDialog
- Client() : BALL::Client
- clinkInner_() : BALL::PoseClustering
- ClippingDialog() : BALL::VIEW::ClippingDialog
- ClippingPlane() : BALL::VIEW::ClippingPlane
- clone() : BALL::Composite, BALL::DoubleGene, BALL::GenericGene, BALL::QuaternionGene, BALL::VIEW::BoolEditorWidget, BALL::VIEW::DoubleEditorWidget, BALL::VIEW::FloatEditorWidget, BALL::VIEW::IntEditorWidget, BALL::VIEW::PDBInfoEditorWidget, BALL::VIEW::PropDeleteWidget, BALL::VIEW::PropEditorWidget, BALL::VIEW::StringEditorWidget, BALL::VIEW::UIntEditorWidget
- cloneBond() : BALL::Atom
- close() : BALL::DockResultFile, BALL::File, BALL::GenericMolFile, BALL::ParamFile, BALL::ResourceFile
- close_pressed() : BALL::VIEW::PeptideDialog, BALL::VIEW::UndoManagerDialog
- closeClicked() : BALL::VIEW::DockResultDialog
- closeEvent() : BALL::VIEW::MainControl, BALL::VIEW::SnapshotVisualisationDialog
- ClusterProperties() : BALL::PoseClustering::ClusterProperties
- clusterRings_() : BALL::RingAnalyser
- ClusterTreeNodeComparator() : BALL::PoseClustering::ClusterTreeNodeComparator
- ClusterTreeWriter_() : BALL::PoseClustering::ClusterTreeWriter_
- coarsePenalty() : BALL::PartialBondOrderAssignment
- collapseAll() : BALL::VIEW::MolecularControl
- collectAromaticAtoms_() : BALL::Kekuliser
- collectAtoms_() : BALL::ForceField
- collectBonds_() : BALL::MMFF94
- collectClasses_() : BALL::VIEW::HelpViewer
- collectClusterBelow_() : BALL::PoseClustering
- collectHeteroAtomTypes() : BALL::MMFF94AtomTyper
- collectPositions() : BALL::VIEW::AddBackboneModel
- collectRecursive_() : BALL::VIEW::Representation
- collectRingBonds_() : BALL::VIEW::AddBallAndStickModel
- collectRings_() : BALL::MMFF94
- collectSystems_() : BALL::Kekuliser
- ColorButton() : BALL::VIEW::ColorButton
- colorByCustomColor_() : BALL::VIEW::ModifyRepresentationDialog
- colorByGrid_() : BALL::VIEW::ModifyRepresentationDialog
- ColorByGridProcessor() : BALL::VIEW::ColorByGridProcessor
- colorChanged() : BALL::VIEW::ColorButton
- ColorExtension2() : BALL::VIEW::ColorExtension2
- ColorHSV() : BALL::VIEW::ColorHSV
- coloringMuteableByDisplayProperties() : BALL::VIEW::ModelInformation
- coloringOptionsPressed() : BALL::VIEW::DisplayProperties
- ColoringSettingsDialog() : BALL::VIEW::ColoringSettingsDialog
- coloringUpdateEnabled() : BALL::VIEW::Representation
- coloringUpdatesChanged() : BALL::VIEW::DisplayProperties
- ColorMap() : BALL::VIEW::ColorMap
- colorMeshFromGrid_() : BALL::VIEW::ColorProcessor
- colorPressed() : BALL::VIEW::LightSettings
- ColorProcessor() : BALL::VIEW::ColorProcessor
- ColorRGBA() : BALL::VIEW::ColorRGBA
- ColorTable() : BALL::VIEW::ColorTable
- ColorUnit() : BALL::VIEW::ColorUnit
- ColorUnitHue() : BALL::VIEW::ColorUnitHue
- columnCount() : BALL::VIEW::ShortcutTableModel
- combine() : BALL::FPTBondOrderStrategy::Assignment_
- combineDatapoints() : BALL::MPISupport
- combineEachSolution_() : BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
- ComboBoxDelegate() : BALL::VIEW::ComboBoxDelegate
- CommandlineParser() : BALL::CommandlineParser
- Comparator() : BALL::Comparator< T >
- compare() : BALL::FPTBondOrderStrategy::Assignment_, BALL::FPTBondOrderStrategy::BackTrackingState_, BALL::FPTBondOrderStrategy::DPConfig_, BALL::FPTBondOrderStrategy::DPJoinMapComparator_, BALL::Object, BALL::String
- Compare_() : BALL::DockResult::Compare_, BALL::VIEW::DockResultDialog::Compare_
- compareChains_() : BALL::SDGenerator
- compareChildren_() : BALL::ExpressionTree
- compareJoinTablePairs_() : BALL::FPTBondOrderStrategy
- compareTablePointerEntries_() : BALL::FPTBondOrderStrategy
- compilePattern() : BALL::VIEW::PythonHighlighter
- complementSelection() : BALL::VIEW::MainControl
- complementSelectionHelper_() : BALL::VIEW::MainControl
- completionSelected_() : BALL::VIEW::PyWidget
- Component() : BALL::NMRStarFile::Sample::Component
- ComponentFilter_() : BALL::TreeWidth< UndirectedGraph >::ComponentFilter_< ComponentMap >
- ComposedEnergyProcessor() : BALL::ComposedEnergyProcessor
- Composite() : BALL::Composite
- CompositeIteratorTraits() : BALL::Composite::CompositeIteratorTraits, BALL::CompositeIteratorTraits
- CompositeManager() : BALL::VIEW::CompositeManager
- CompositeMessage() : BALL::VIEW::CompositeMessage
- CompositeProperties() : BALL::VIEW::CompositeProperties
- compositeProperties() : BALL::VIEW::MolecularControl
- compositesAreLocked() : BALL::VIEW::MainControl
- compute() : BALL::AtomInformationContent, BALL::Descriptor, BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_, BALL::NumberOfHydrogenBondAcceptors, BALL::NumberOfHydrogenBondDonors, BALL::NumberOfHydrophobicAtoms, BALL::PoseClustering, BALL::ReducedSurface, BALL::RelHydrophobicVdWSurface, BALL::RelNegativePolarVdWSurface, BALL::RelNegativeVdWSurface, BALL::RelNumberOfRotatableBonds, BALL::RelNumberOfRotatableSingleBonds, BALL::RelPolarVdWSurface, BALL::RelPositivePolarVdWSurface, BALL::RelPositiveVdWSurface, BALL::SolventAccessibleSurface, BALL::SolventExcludedSurface, BALL::TreeWidthImplementation< UndirectedGraph >::QuickBB< Lowerbound, Upperbound >, BALL::TriangulatedSAS, BALL::TriangulatedSES, BALL::VertexAdjacency, BALL::VertexAdjacencyEquality, BALL::ZagrebIndex
- compute_() : BALL::SecondaryStructureProcessor
- computeAdjacencyMatrix_() : BALL::SDGenerator
- computeAllDescriptors() : BALL::ConnectivityBase, BALL::PartialChargeBase, BALL::SimpleBase, BALL::SurfaceBase
- computeAllMoments() : BALL::Spectrum< DataT, PeakT, PositionT >
- computeAngularDemand_() : BALL::SDGenerator
- computeAngularSeparation_() : BALL::SDGenerator
- computeBitSize() : BALL::VIEW::PixelFormat
- computeBondOrders() : BALL::VIEW::Scene
- computeByteSize() : BALL::VIEW::PixelFormat
- computeCenterOfMasses_() : BALL::PoseClustering
- computeCFS_() : BALL::SDGenerator
- computeCompleteLinkageRMSD() : BALL::PoseClustering
- computeCoreCFS_() : BALL::SDGenerator
- computeCovarianceMatrix() : BALL::PoseClustering
- computeDefaultPressed() : BALL::VIEW::StageSettings
- computeDistance() : BALL::PeptideCapProcessor
- computeForgetBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
- computeHuInvariants() : BALL::Spectrum< DataT, PeakT, PositionT >
- computeHuInvariantsDifferences() : BALL::Spectrum< DataT, PeakT, PositionT >
- computeIntroduceBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
- computeIsoContourSurface() : BALL::VIEW::RegularData3DController
- computeJoinBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
- computeLeafIntroduceBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
- computeNextSolution() : BALL::AssignBondOrderProcessor, BALL::AStarBondOrderStrategy, BALL::BondOrderAssignmentStrategy, BALL::BranchAndBoundBondOrderStrategy, BALL::FPTBondOrderStrategy, BALL::ILPBondOrderStrategy, BALL::KGreedyBondOrderStrategy, BALL::VIEW::AssignBondOrderResultsDialog
- computeProperties_() : BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
- computeRootBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
- computeSettingsFromModelDistance() : BALL::VIEW::StereoSettingsDialog
- computeShelleyPriorities_() : BALL::SDGenerator
- computeSize() : BALL::VIEW::FrameBufferFormat
- computeSphereTesselation_() : BALL::NumericalSAS
- computeTilingSetup_() : BALL::VIEW::TilingRenderer
- computeTopology() : BALL::TContourSurface< T >::Cube
- computeTransformation() : BALL::RMSDMinimizer
- computeTreeWidth() : BALL::TreeWidth< UndirectedGraph >
- computeTriangles() : BALL::TContourSurface< T >
- computeVirtualHydrogens_() : BALL::AssignBondOrderProcessor
- computeWardDistance_() : BALL::PoseClustering
- ComputingData_() : BALL::FPTBondOrderStrategy::ComputingData_
- ConfigDialog() : BALL::VIEW::ConfigDialog
- ConfigurationReadingError() : BALL::QSAR::Exception::ConfigurationReadingError
- Conformation() : BALL::Conformation
- ConformationSet() : BALL::ConformationSet
- ConjugateGradientMinimizer() : BALL::ConjugateGradientMinimizer
- connect() : BALL::Client, BALL::DisulfidBondProcessor
- connectChilds_() : BALL::VIEW::PTEDialog
- connectedComponents() : BALL::BinaryFingerprintMethods
- ConnectedComponentsProcessor() : BALL::ConnectedComponentsProcessor
- ConnectedToPredicate() : BALL::ConnectedToPredicate
- ConnectionObject() : BALL::VIEW::ConnectionObject
- connectionRequested() : BALL::TCPServer
- ConnectivityBase() : BALL::ConnectivityBase
- connectTo() : BALL::DockProblem
- ConstBidirectionalIterator() : BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
- ConstForwardIterator() : BALL::ConstForwardIterator< Container, DataType, Position, Traits >
- Constraint() : BALL::Constraint
- ConstRandomAccessIterator() : BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
- construct() : BALL::Peptides::PeptideBuilder
- constructExpressionTree_() : BALL::Expression
- constructRingSystem_() : BALL::SDGenerator
- containsAtomChilds_() : BALL::MOL2File
- containsSelection() : BALL::Composite
- contentsDragEnterEvent() : BALL::VIEW::DragLogView, BALL::VIEW::PyWidget
- contentsDragLeaveEvent() : BALL::VIEW::DragLogView
- contentsDropEvent() : BALL::VIEW::DragLogView, BALL::VIEW::PyWidget
- ContourSurfaceDialog() : BALL::VIEW::ContourSurfaceDialog
- contractEdge() : BALL::TreeWidthImplementation< UndirectedGraph >::MinorMinWidthReducer
- ControlSelectionMessage() : BALL::VIEW::ControlSelectionMessage
- convertBrick_() : BALL::DSN6File
- convertCameraToSceneCoordinates() : BALL::VIEW::Camera
- convertMaterial() : BALL::VIEW::RTfactRenderer
- convertName() : BALL::Peptides::NameConverter
- convertObject() : BALL::MoleculeObjectCreator, BALL::ObjectCreator
- convertSnaphots2Transformations() : BALL::PoseClustering
- convertTime() : BALL::ScoringFunction
- convertToFullAssignment() : BALL::PartialBondOrderAssignment
- convertToGaussian() : BALL::Spectrum< DataT, PeakT, PositionT >
- convertToLorentzian() : BALL::Spectrum< DataT, PeakT, PositionT >
- convertToRegularData3DGrids() : BALL::ScoreGridSet
- convertTransformations2Snaphots() : BALL::PoseClustering
- coordinateSystemEnabled() : BALL::VIEW::Stage
- copy() : BALL::File, BALL::String, BALL::TriangulatedSurface, BALL::VIEW::MolecularControl
- copyAdvancedParametersToOptions() : BALL::CommandlineParser
- copyData() : BALL::QSAR::Model
- copyDescriptorIDs() : BALL::QSAR::Model
- copyTo() : BALL::File
- correctASUPositions_() : BALL::CrystalGenerator
- CosineTorsion() : BALL::CosineTorsion
- count() : BALL::Composite
- countAtomContainers() : BALL::AtomContainer
- countAtoms() : BALL::AtomContainer, BALL::System
- countBondOrders() : BALL::AddHydrogenProcessor
- countBonds() : BALL::Atom, BALL::AtomContainer
- countChains() : BALL::Protein, BALL::System
- countChildren() : BALL::ResourceEntry
- countComponents() : BALL::ForceField
- countConformations() : BALL::DockResultFile
- countCovalentBonds() : BALL::ScoringFunction
- countDescendants() : BALL::Composite, BALL::ResourceEntry
- countDirectories() : BALL::Directory
- countEdges() : BALL::SmartsParser::SPNode
- countFields() : BALL::String
- countFieldsQuoted() : BALL::String
- countFiles() : BALL::Directory
- countFragments() : BALL::System
- countFragments_() : BALL::StructureMapper
- countInstances_() : BALL::Embeddable
- countInterBonds() : BALL::AtomContainer
- countIntraBonds() : BALL::AtomContainer
- countItems() : BALL::Directory, BALL::VIEW::MolecularControl
- countMolecules() : BALL::SDFile, BALL::System
- countNamedProperties() : BALL::PropertyManager
- countNeighboringReceptorAtoms() : BALL::ScoringFunction
- countNonEmptyBoxes() : BALL::HashGrid3< Item >
- countNucleicAcids() : BALL::System
- countNucleotides() : BALL::NucleicAcid, BALL::System
- countPDBAtoms() : BALL::Chain, BALL::Protein, BALL::Residue, BALL::SecondaryStructure
- countProperties() : BALL::PropertyManager, BALL::SmartsParser::SPAtom
- countProteins() : BALL::System
- countRealValences() : BALL::SmartsParser::SPAtom, BALL::SmilesParser::SPAtom
- countRecord() : BALL::PDBFile
- countRecordFields() : BALL::PDBFile
- countRecords() : BALL::PDBFile
- countResidues() : BALL::Chain, BALL::Protein, BALL::SecondaryStructure, BALL::System
- countSecondaryStructures() : BALL::Chain, BALL::Protein, BALL::System
- countSubexpressions() : BALL::RegularExpression
- countValue() : BALL::BitVector
- countVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
- crbegin() : BALL::String
- create() : BALL::Directory, BALL::Factory< T >, BALL::QSAR::ModelFactory< T >, BALL::String
- create6Ring_() : BALL::VIEW::AddCartoonModel
- createActions_() : BALL::VIEW::EditMode
- createAllLigandNonBondedPairs() : BALL::ScoringFunction
- createAtom() : BALL::SmartsParser, BALL::SmilesParser
- createAtomGrid() : BALL::VIEW::ColorProcessor
- createBond() : BALL::Atom, BALL::Bond, BALL::SmilesParser
- createBond_() : BALL::VIEW::EditMode
- createBonds() : BALL::SmilesParser
- createBoundaryMolecule() : BALL::ReferenceArea
- createBoxes_() : BALL::VIEW::GLRenderer
- createColorProcessor() : BALL::VIEW::ColoringSettingsDialog
- createCombination() : BALL::Enumerator< Container, SiteIterator, Variant >
- createContourLine() : BALL::TContourLine< T >
- createCoordinateSystem() : BALL::VIEW::Scene
- createCoordinateSystem_() : BALL::VIEW::Scene
- createCoordinateSystemAtOrigin() : BALL::VIEW::Scene
- createDisk() : BALL::TriangulatedSurface
- createDotBox_() : BALL::VIEW::GLRenderer
- createDottedSphere_() : BALL::VIEW::GLRenderer
- createDoubleRing_() : BALL::VIEW::AddCartoonModel
- createEditor() : BALL::VIEW::ComboBoxDelegate
- createEditorWidget_() : BALL::VIEW::PropertyEditor
- createEntries() : BALL::VIEW::AssignBondOrderResultsDialog
- createEvaluationMethod() : BALL::VIEW::DockingController
- createFieldLine_() : BALL::VIEW::FieldLineCreator
- createFPSInfo_() : BALL::VIEW::Scene
- createGeometricObjects() : BALL::VIEW::AddBackboneModel, BALL::VIEW::AddBallAndStickModel, BALL::VIEW::AddSurfaceModel, BALL::VIEW::AtomBondModelBaseProcessor, BALL::VIEW::LabelModel, BALL::VIEW::ModelProcessor
- createGridFromCameraDistance() : BALL::VIEW::MolecularStructure
- createGridFromDistance() : BALL::VIEW::MolecularStructure
- createHelix_() : BALL::VIEW::AddCartoonModel
- createHistogramGrid() : BALL::VIEW::RegularData3DController
- createHotkey() : BALL::VIEW::Hotkey
- createKernel1() : BALL::QSAR::ModelFactory< T >
- createKernel2() : BALL::QSAR::ModelFactory< T >
- createLigandNonbondedPairVector() : BALL::ScoringFunction
- createLineBox_() : BALL::VIEW::GLRenderer
- createLines() : BALL::VIEW::FieldLineCreator
- createMap() : BALL::VIEW::ColorMap
- createMapJet() : BALL::VIEW::ColorMap
- createMapping() : BALL::NMRStarFile::BALLToBMRBMapper
- createMenuEntries() : BALL::VIEW::DatasetController, BALL::VIEW::DockResultController, BALL::VIEW::RaytraceableGridController, BALL::VIEW::RegularData3DController, BALL::VIEW::TrajectoryController, BALL::VIEW::VectorGridController
- createMenuHelpEntry_() : BALL::VIEW::PyWidget
- createModel_() : BALL::VIEW::AddBackboneModel, BALL::VIEW::AddCartoonModel
- createModelProcessor() : BALL::VIEW::ModelSettingsDialog
- createModule_() : BALL::ShiftModel
- createMolecule_() : BALL::VIEW::Scene
- createMultipleLabels_() : BALL::VIEW::LabelDialog
- createNewBool_() : BALL::VIEW::PropertyEditor
- createNewClippingPlane() : BALL::VIEW::GeometricControl
- createNewDouble_() : BALL::VIEW::PropertyEditor
- createNewFloat_() : BALL::VIEW::PropertyEditor
- createNewInt_() : BALL::VIEW::PropertyEditor
- createNewMolecule() : BALL::VIEW::Scene
- createNewString_() : BALL::VIEW::PropertyEditor
- createNewUInt_() : BALL::VIEW::PropertyEditor
- createNonbondedPairVector() : BALL::ScoringFunction
- createObject() : BALL::PersistenceManager
- createOneLabel_() : BALL::VIEW::LabelDialog
- createPeak_() : BALL::ShiftModel2D
- createPopupMenu() : BALL::VIEW::MainControl
- createRaytraceableGrid() : BALL::VIEW::RegularData3DController
- createRepresentation() : BALL::VIEW::DisplayProperties, BALL::VIEW::MolecularControl, BALL::VIEW::RepresentationManager
- createRepresentation_() : BALL::VIEW::MolecularControl
- CreateRepresentationMessage() : BALL::VIEW::CreateRepresentationMessage
- createRepresentationMode() : BALL::VIEW::DisplayProperties
- createResidue_() : BALL::Peptides::PeptideBuilder
- createRibbon_() : BALL::VIEW::AddBackboneModel
- createScript_() : BALL::VIEW::PyWidget
- createSimpleNucleicAcid_() : BALL::VIEW::AddCartoonModel
- createSolidBox_() : BALL::VIEW::GLRenderer
- CreateSpectrumProcessor() : BALL::CreateSpectrumProcessor
- createSphere() : BALL::VIEW::RegularData3DController
- createSpheres_() : BALL::VIEW::GLRenderer
- createSphereTemplate_() : BALL::VIEW::XML3DRenderer
- createStaticLigandFragments() : BALL::ScoringFunction
- createStrand_() : BALL::VIEW::AddCartoonModel
- createSubcategory() : BALL::Options
- createTemporaryFilename() : BALL::File
- createTexture() : BALL::VIEW::GLRenderWindow
- createTextureFromGrid() : BALL::VIEW::GLRenderer
- createTrivialMapping() : BALL::NMRStarFile::BALLToBMRBMapper
- createTube() : BALL::TriangulatedSurface
- createTube_() : BALL::VIEW::AddBackboneModel
- createTubeHelix_() : BALL::VIEW::AddCartoonModel
- createTubes_() : BALL::VIEW::GLRenderer
- createTubeTransform_() : BALL::VIEW::XML3DRenderer
- createVectorGrid() : BALL::VIEW::RegularData3DController
- createVoid() : BALL::Factory< T >
- createWatsonCrickModel_() : BALL::VIEW::AddCartoonModel
- createXHTMLFooter() : BALL::VIEW::XML3DRenderer
- createXHTMLHeader() : BALL::VIEW::XML3DRenderer
- crend() : BALL::String
- crossValidation() : BALL::QSAR::ClassificationValidation, BALL::QSAR::RegressionValidation, BALL::QSAR::Validation
- CrystalGenerator() : BALL::CrystalGenerator
- CrystalInfo() : BALL::CrystalInfo
- CTPNode() : BALL::ConnectedToPredicate::CTPNode
- Cube() : BALL::TContourSurface< T >::Cube
- CubicFunction() : BALL::CubicFunction< Function, DataType >
- CubicSpline1D() : BALL::CubicSpline1D
- CubicSpline2D() : BALL::CubicSpline2D
- CUDAError() : BALL::Exception::CUDAError
- currentEntry() : BALL::VIEW::Preferences
- currentPage() : BALL::VIEW::Preferences
- currentStackPage() : BALL::VIEW::PreferencesEntry
- CustomColorProcessor() : BALL::VIEW::CustomColorProcessor
- customColorTransparencyChanged() : BALL::VIEW::ModifyRepresentationDialog
- customEvent() : BALL::VIEW::GLRenderWindow, BALL::VIEW::Scene
- cut() : BALL::TriangulatedSurface, BALL::VIEW::MolecularControl
- cutoffSearch() : BALL::BinaryFingerprintMethods
- cys_pressed() : BALL::VIEW::PeptideDialog