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BALL::VIEW::AddCartoonModel Member List

This is the complete list of members for BALL::VIEW::AddCartoonModel, including all inherited members.

AddBackboneModel() | BALL::VIEW::AddBackboneModel |
AddBackboneModel(const AddBackboneModel &add_Backbone_model) | BALL::VIEW::AddBackboneModel |
AddCartoonModel() | BALL::VIEW::AddCartoonModel |
AddCartoonModel(const AddCartoonModel &cartoon_model) | BALL::VIEW::AddCartoonModel |
argument_pointer typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
argument_reference typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
argument_type typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
arrow_width_ | BALL::VIEW::AddCartoonModel | protected
assignModelType(ModelPart &part) | BALL::VIEW::AddCartoonModel | protected virtual
assignNucleotideAtoms_(Residue &r, Size nr_atoms, String atom_names[10], Atom *atoms[10]) | BALL::VIEW::AddCartoonModel | protected
backbone_ | BALL::VIEW::AddBackboneModel | protected
beginNamedProperty() | BALL::PropertyManager |
calculateComplementaryBases_(const Composite &composite) | BALL::VIEW::AddCartoonModel | protected
calculateGuidePoints_() | BALL::VIEW::AddBackboneModel | protected virtual
calculateModelParts(Protein &protein) | BALL::VIEW::AddCartoonModel | protected virtual
calculateRibbonEllipse_(float ribbon_width, float ribbon_height) | BALL::VIEW::AddBackboneModel | inline protected
calculateRibbonPoints_(Vector3 xn, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | inline protected
calculateTubePoints_(Vector3 right, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | inline protected
care_for_SS_ | BALL::VIEW::AddBackboneModel | protected
clear() | BALL::VIEW::AddBackboneModel | virtual
clear_() | BALL::VIEW::AddBackboneModel | protected virtual
clearComposites() | BALL::VIEW::ModelProcessor | inline virtual
clearProperty(Property property) | BALL::PropertyManager |
clearProperty(const std::string &name) | BALL::PropertyManager |
collectPositions(vector< Residue * > residues) | BALL::VIEW::AddBackboneModel | protected virtual
complementary_bases_ | BALL::VIEW::AddCartoonModel | protected
const_argument_pointer typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
const_argument_reference typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
countNamedProperties() const | BALL::PropertyManager |
countProperties() const | BALL::PropertyManager |
create6Ring_(vector< Vector3 > positions) | BALL::VIEW::AddCartoonModel | protected
createDoubleRing_(const vector< Vector3 > &positions) | BALL::VIEW::AddCartoonModel | protected
createGeometricObjects() | BALL::VIEW::AddBackboneModel | virtual
createHelix_(Position set_first, Position part_pos) | BALL::VIEW::AddCartoonModel | protected
createModel_(Position set_pos, Position part_pos) | BALL::VIEW::AddCartoonModel | protected virtual
createRibbon_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | protected virtual
createSimpleNucleicAcid_(Position set_pos, Position part_pos) | BALL::VIEW::AddCartoonModel | protected
createStrand_(Position set_pos, Position part_pos) | BALL::VIEW::AddCartoonModel | protected
createTube_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | protected virtual
createTubeHelix_(Position set_first, Position part_pos) | BALL::VIEW::AddCartoonModel | protected
createWatsonCrickModel_(Position set_pos, Position part_pos) | BALL::VIEW::AddCartoonModel | protected
destroy() | BALL::PropertyManager | virtual
DNA_base_radius_ | BALL::VIEW::AddCartoonModel | protected
DNA_helix_radius_ | BALL::VIEW::AddCartoonModel | protected
DNA_ladder_radius_ | BALL::VIEW::AddCartoonModel | protected
draw_DNA_as_ladder_ | BALL::VIEW::AddCartoonModel | protected
draw_ribbon_ | BALL::VIEW::AddCartoonModel | protected
drawDNAAsLadderModel() | BALL::VIEW::AddCartoonModel | inline
drawing_precision_ | BALL::VIEW::ModelProcessor | protected
drawRiboseAtoms_(const Atom *atom1, const Atom *atom2, const Vector3 &v1, const Vector3 &v2) | BALL::VIEW::AddCartoonModel | protected
drawStrand_(const Vector3 &start, Vector3 &right, Vector3 &hn, float arrow_width, Position &last_vertices, Mesh &mesh) | BALL::VIEW::AddCartoonModel | inline protected
dummy_chain_ | BALL::VIEW::AddBackboneModel | protected
dummy_protein_ | BALL::VIEW::AddBackboneModel | protected
dummy_ss_ | BALL::VIEW::AddBackboneModel | protected
dump(std::ostream &s=std::cout, Size depth=0) const | BALL::VIEW::AddBackboneModel | virtual
enableRibbons(bool state) | BALL::VIEW::AddCartoonModel | inline
endNamedProperty() | BALL::PropertyManager |
evaluateBSpline(const Vector3 &v1, const Vector3 &v2, const Vector3 &v3, float x, Vector3 &result) | BALL::VIEW::AddBackboneModel | inline protected
finish() | BALL::UnaryProcessor< Composite > | inline virtual
geometric_objects_ | BALL::VIEW::ModelProcessor | protected
get(PropertyManager &property_manager) const | BALL::PropertyManager |
getArrowWidth() const | BALL::VIEW::AddCartoonModel | inline
getBitVector() | BALL::PropertyManager |
getBitVector() const | BALL::PropertyManager |
getDNABaseRadius() const | BALL::VIEW::AddCartoonModel | inline
getDNAHelixRadius() const | BALL::VIEW::AddCartoonModel | inline
getDNALadderRadius() const | BALL::VIEW::AddCartoonModel | inline
getDrawingPrecision() const | BALL::VIEW::ModelProcessor |
getGeometricObjects() | BALL::VIEW::ModelProcessor | inline
getGeometricObjects() const | BALL::VIEW::ModelProcessor | inline
getHelixRadius() const | BALL::VIEW::AddCartoonModel | inline
getNamedProperty(Position index) const | BALL::PropertyManager |
getNamedProperty(Position index) | BALL::PropertyManager |
getProperty(const std::string &name) const | BALL::PropertyManager |
getStrandHeight() const | BALL::VIEW::AddCartoonModel | inline
getStrandWidth() const | BALL::VIEW::AddCartoonModel | inline
getSurfaceDrawingPrecision() const | BALL::VIEW::ModelProcessor |
getTubeRadius() const | BALL::VIEW::AddBackboneModel | inline
guide_points_ | BALL::VIEW::AddBackboneModel | protected
hasProperty(Property property) const | BALL::PropertyManager |
hasProperty(const std::string &name) const | BALL::PropertyManager |
HELIX enum value | BALL::VIEW::AddCartoonModel |
helix_height_ | BALL::VIEW::AddCartoonModel | protected
helix_radius_ | BALL::VIEW::AddCartoonModel | protected
helix_width_ | BALL::VIEW::AddCartoonModel | protected
insertTriangle_(Position v1, Position v2, Position v3, Mesh &mesh) | BALL::VIEW::AddCartoonModel | protected
interpolate_() | BALL::VIEW::AddBackboneModel | protected virtual
interpolated_points_ | BALL::VIEW::AddBackboneModel | protected
interpolation_steps_ | BALL::VIEW::AddBackboneModel | protected
isValid() const | BALL::VIEW::ModelProcessor | inline virtual
last_protein_ | BALL::VIEW::AddBackboneModel | protected
middle_ribbon_ | BALL::VIEW::AddBackboneModel | protected
middle_slide_ | BALL::VIEW::AddBackboneModel | protected
model_parts_ | BALL::VIEW::AddBackboneModel | protected
ModelProcessor() | BALL::VIEW::ModelProcessor |
ModelProcessor(const ModelProcessor &model_processor) | BALL::VIEW::ModelProcessor |
ModelTypes enum name | BALL::VIEW::AddBackboneModel | protected
NUCLEIC_ACID enum value | BALL::VIEW::AddBackboneModel | protected
number_of_ribbons_ | BALL::VIEW::AddBackboneModel | protected
offsets_ | BALL::VIEW::AddBackboneModel | protected
operator BitVector &() | BALL::PropertyManager |
operator!=(const PropertyManager &pm) const | BALL::PropertyManager |
operator()(Composite &composite) | BALL::VIEW::AddBackboneModel | virtual
operator=(const PropertyManager &property_manager) | BALL::PropertyManager |
operator==(const PropertyManager &pm) const | BALL::PropertyManager |
PropertyManager() | BALL::PropertyManager |
PropertyManager(const PropertyManager &property_manager) | BALL::PropertyManager |
read(PersistenceManager &pm) | BALL::PropertyManager |
refineGuidePoints_() | BALL::VIEW::AddCartoonModel | protected virtual
refineModelParts_() | BALL::VIEW::AddBackboneModel | protected virtual
renderNucleotideOutline_(const vector< Vector3 > &positions, Vector3 uv, Mesh &mesh) | BALL::VIEW::AddCartoonModel | protected
residues_to_be_rendered_ | BALL::VIEW::AddBackboneModel | protected
residuesAreConnected_(Residue &residue1, Residue &residue2) | BALL::VIEW::AddBackboneModel | inline protected
result_type typedef | BALL::UnaryFunctor< ArgumentType, ResultType > |
RIBBON enum value | BALL::VIEW::AddBackboneModel | protected
ribbon_height_ | BALL::VIEW::AddBackboneModel | protected
ribbon_mode_ | BALL::VIEW::AddBackboneModel | protected
ribbon_radius_ | BALL::VIEW::AddCartoonModel | protected
ribbon_width_ | BALL::VIEW::AddCartoonModel | protected
ribbonModeEnabled() const | BALL::VIEW::AddBackboneModel | inline
ribbonsEnabled() const | BALL::VIEW::AddCartoonModel | inline
set(const PropertyManager &property_manager) | BALL::PropertyManager |
setArrowWidth(float width) | BALL::VIEW::AddCartoonModel | inline
setDNABaseRadius(float r) | BALL::VIEW::AddCartoonModel | inline
setDNAHelixRadius(float r) | BALL::VIEW::AddCartoonModel | inline
setDNALadderRadius(float r) | BALL::VIEW::AddCartoonModel | inline
setDrawDNAAsLadderModel(bool state) | BALL::VIEW::AddCartoonModel | inline
setDrawingPrecision(Index precision) | BALL::VIEW::ModelProcessor |
setHelixRadius(float radius) | BALL::VIEW::AddCartoonModel | inline
setProperty(Property property) | BALL::PropertyManager |
setProperty(const NamedProperty &property) | BALL::PropertyManager |
setProperty(const std::string &name) | BALL::PropertyManager |
setProperty(const std::string &name, bool value) | BALL::PropertyManager |
setProperty(const std::string &name, int value) | BALL::PropertyManager |
setProperty(const std::string &name, unsigned int value) | BALL::PropertyManager |
setProperty(const std::string &name, float value) | BALL::PropertyManager |
setProperty(const std::string &name, double value) | BALL::PropertyManager |
setProperty(const std::string &name, const std::string &value) | BALL::PropertyManager |
setProperty(const std::string &name, const PersistentObject &value) | BALL::PropertyManager |
setRibbonMode(bool state) | BALL::VIEW::AddBackboneModel | inline
setStrandHeight(float heigth) | BALL::VIEW::AddCartoonModel | inline
setStrandWidth(float w) | BALL::VIEW::AddCartoonModel | inline
setSurfaceDrawingPrecision(float precision) | BALL::VIEW::ModelProcessor |
setTubeRadius(float radius) | BALL::VIEW::AddBackboneModel | inline
slides_ | BALL::VIEW::AddBackboneModel | protected
slides_angle_ | BALL::VIEW::AddBackboneModel | protected
ss_ | BALL::VIEW::AddBackboneModel | protected
start() | BALL::VIEW::AddBackboneModel | virtual
STRAND enum value | BALL::VIEW::AddCartoonModel |
strand_height_ | BALL::VIEW::AddCartoonModel | protected
strand_width_ | BALL::VIEW::AddCartoonModel | protected
surface_drawing_precision_ | BALL::VIEW::ModelProcessor | protected
swap(PropertyManager &property_manager) | BALL::PropertyManager |
temp_matrix_ | BALL::VIEW::AddBackboneModel | protected
toggleProperty(Property property) | BALL::PropertyManager |
TUBE enum value | BALL::VIEW::AddBackboneModel | protected
tube_radius_ | BALL::VIEW::AddBackboneModel | protected
Types enum name | BALL::VIEW::AddCartoonModel |
UnaryProcessor() | BALL::UnaryProcessor< Composite > | inline
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | inline
write(PersistenceManager &pm) const | BALL::PropertyManager |
xs_ | BALL::VIEW::AddBackboneModel | protected
ys_ | BALL::VIEW::AddBackboneModel | protected
~AddBackboneModel() | BALL::VIEW::AddBackboneModel | virtual
~AddCartoonModel() | BALL::VIEW::AddCartoonModel | virtual
~ModelProcessor() | BALL::VIEW::ModelProcessor | virtual
~PropertyManager() | BALL::PropertyManager | virtual
~UnaryProcessor() | BALL::UnaryProcessor< Composite > | inline virtual