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Here is a list of all functions with links to the classes they belong to:

### - u -

- UCK() : BALL::UCK
- UhligCavFreeEnergyProcessor() : BALL::UhligCavFreeEnergyProcessor
- UIntEditorWidget() : BALL::VIEW::UIntEditorWidget
- UIOperationMode() : BALL::VIEW::UIOperationMode
- UnaryProcessor() : BALL::UnaryProcessor< T >
- unbind() : BALL::Substring
- UnboundSubstring() : BALL::Substring::UnboundSubstring
- UnconnectedGraphException() : BALL::GRAPH::UnconnectedGraphException
- undo() : BALL::GRAPH::UndoEliminateOperation< UndirectedGraph >
- UndoEliminateOperation() : BALL::GRAPH::UndoEliminateOperation< UndirectedGraph >
- UndoManagerDialog() : BALL::VIEW::UndoManagerDialog
- UnitCellInfo() : BALL::PDB::Structure::UnitCellInfo
- unloadAllPlugins() : BALL::PluginManager
- unloadDirectoryPlugins_() : BALL::PluginManager
- unloadPlugin() : BALL::PluginManager
- unlock() : BALL::VIEW::RenderSetup
- unlockComposites() : BALL::VIEW::ModularWidget
- unlockCompositesFor() : BALL::VIEW::MainControl
- unlockGLContext() : BALL::VIEW::GLRenderWindow
- unmap() : BALL::VIEW::PyWidget
- unregister() : BALL::LogStreamNotifier
- unregisterChildEntry() : BALL::VIEW::PluginDialog
- unregisterConnectionObject() : BALL::VIEW::ConnectionObject
- unregisterForHelpSystem() : BALL::VIEW::HelpViewer
- unregisterHandler() : BALL::PluginManager
- unregisterInstance_() : BALL::Embeddable
- unregisterModule() : BALL::ShiftModel
- unregisterObject_() : BALL::VIEW::PreferencesEntry
- unregisterObjectCreator() : BALL::VIEW::ServerWidget
- unregisterThis() : BALL::Embeddable
- unregisterTransformation() : BALL::File, BALL::TransformationManager
- unsetFinished() : BALL::ConnectedToPredicate::CTPNode
- unsetInsertionCode() : BALL::Nucleotide, BALL::Residue
- unsetLinked() : BALL::ConnectedToPredicate::CTPNode
- unsetSSSR() : BALL::SmartsMatcher
- unsetTrainingParameters() : BALL::ScoringFunction
- update() : BALL::AmberNonBonded, BALL::AromaticRingStacking, BALL::BurialDepth, BALL::BuriedPolar, BALL::CHPI::AromaticRing, BALL::CHPI, BALL::CHPISlick, BALL::DiffGridBasedScoring, BALL::Electrostatic, BALL::ForceField, BALL::ForceFieldComponent, BALL::FragmentationalSolvation, BALL::HydrogenBond, BALL::HydrogenBondSlick, BALL::IMGDock, BALL::Lipophilic, BALL::MMFF94NonBonded, BALL::NonpolarSolvation, BALL::PB, BALL::PLP, BALL::Polarity, BALL::PolarSolvation, BALL::RotationalEntropy, BALL::ScoringComponent, BALL::ScoringFunction, BALL::Solvation, BALL::VanDerWaals, BALL::VanDerWaalsSlick, BALL::VIEW::LightSettings, BALL::VIEW::MainControl, BALL::VIEW::Representation
- update_() : BALL::VIEW::Representation, BALL::VIEW::RepresentationManager, BALL::VIEW::SnapshotVisualisationDialog
- updateAdditionalAtomInfo_() : BALL::PDBFile
- updateAllMaterials() : BALL::VIEW::Scene
- updateAlwaysNeeded() : BALL::VIEW::ColorProcessor
- updateBackgroundColor() : BALL::VIEW::GLRenderer, BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::RTfactRenderer, BALL::VIEW::TilingRenderer
- updateBendEnergy() : BALL::MMFF94StretchBend
- updateBendForces() : BALL::MMFF94StretchBend
- updateCamera() : BALL::VIEW::GLRenderer, BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::RTfactRenderer, BALL::VIEW::TilingRenderer
- updateClippingPlanes() : BALL::VIEW::GeometricControl
- updateComponent() : BALL::ScoringFunction
- updateContextMenu() : BALL::VIEW::MolecularControl
- updateDefaultMaterialsFromStage() : BALL::VIEW::MaterialSettings
- updateDirection() : BALL::ConjugateGradientMinimizer, BALL::EnergyMinimizer, BALL::ShiftedLVMMMinimizer, BALL::SteepestDescentMinimizer, BALL::StrangLBFGSMinimizer
- updateDirectlyBoxChanged() : BALL::VIEW::LightSettings, BALL::VIEW::MaterialSettings
- updateDownloadProgress() : BALL::VIEW::PubChemDialog
- updateEditorGeometry() : BALL::VIEW::ComboBoxDelegate
- updateEnergy() : BALL::AmberNonBonded, BALL::AmberTorsion, BALL::BendComponent, BALL::CharmmImproperTorsion, BALL::CharmmNonBonded, BALL::CharmmTorsion, BALL::EnergyMinimizer, BALL::ForceField, BALL::ForceFieldComponent, BALL::MMFF94NonBonded, BALL::MMFF94OutOfPlaneBend, BALL::MMFF94StretchBend, BALL::MMFF94Torsion, BALL::PLP, BALL::StretchComponent
- updateFile() : BALL::VIEW::FileObserver
- updateForces() : BALL::AmberNonBonded, BALL::AmberTorsion, BALL::BendComponent, BALL::CharmmImproperTorsion, BALL::CharmmNonBonded, BALL::CharmmTorsion, BALL::EnergyMinimizer, BALL::ForceField, BALL::ForceFieldComponent, BALL::MMFF94NonBonded, BALL::MMFF94OutOfPlaneBend, BALL::MMFF94StretchBend, BALL::MMFF94Torsion, BALL::PLP, BALL::StretchComponent
- updateFromStage() : BALL::VIEW::LightSettings, BALL::VIEW::StageSettings
- updateGL() : BALL::VIEW::Scene
- updateImageTile() : BALL::VIEW::GLOffscreenTarget
- updateInstantaneousTemperature() : BALL::MolecularDynamics
- updateMaterialForRepresentation() : BALL::VIEW::GLRenderer, BALL::VIEW::RaytracingRenderer, BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::RTfactRenderer, BALL::VIEW::Scene
- updateMaterialFromStage() : BALL::VIEW::RTfactRenderer
- updateMolecules() : BALL::PeriodicBoundary
- updateOfRepresentationRunning() : BALL::VIEW::MainControl
- updatePointers_() : BALL::PersistenceManager
- updatePool() : BALL::GeneticAlgorithm
- updatePrecalculatedScore() : BALL::DiffGridBasedScoring, BALL::GridBasedScoring
- updateProgress_() : BALL::VIEW::DockProgressDialog
- updateRepLabel_() : BALL::VIEW::MainControl
- updateRepresentation() : BALL::VIEW::GeometricControl
- updateRepresentations() : BALL::VIEW::CompositeMessage
- updateRepresentationsOf() : BALL::VIEW::MainControl
- UpdateRepresentationThread() : BALL::VIEW::UpdateRepresentationThread
- updateRunning() : BALL::VIEW::RepresentationManager
- updateScore() : BALL::AromaticRingStacking, BALL::BurialDepth, BALL::BuriedPolar, BALL::CHPI, BALL::CHPISlick, BALL::DiffGridBasedScoring, BALL::Electrostatic, BALL::ForceFieldComponent, BALL::FragmentationalSolvation, BALL::HydrogenBond, BALL::HydrogenBondSlick, BALL::Lipophilic, BALL::NonpolarSolvation, BALL::PB, BALL::Polarity, BALL::PolarSolvation, BALL::RotationalEntropy, BALL::ScoringComponent, BALL::ScoringFunction, BALL::Solvation, BALL::VanDerWaals, BALL::VanDerWaalsSlick
- updateSelection() : BALL::VIEW::DatasetControl, BALL::VIEW::GenericControl, BALL::VIEW::GeometricControl, BALL::VIEW::MolecularControl
- updateStretchBendEnergy() : BALL::MMFF94StretchBend
- updateStretchBendForces() : BALL::MMFF94StretchBend
- updateStretchEnergy() : BALL::MMFF94StretchBend
- updateStretchForces() : BALL::MMFF94StretchBend
- updateStructure_() : BALL::VIEW::BALLThread
- updateText_() : BALL::VIEW::EditSingleShortcut
- updateWardDistance_() : BALL::PoseClustering
- uploadFileToBuffer() : BALL::SimpleDownloader
- uploadFileToFile() : BALL::SimpleDownloader
- uploadStringToBuffer() : BALL::SimpleDownloader
- uploadStringToFile() : BALL::SimpleDownloader
- UPThread() : BALL::SimpleDownloaderHelper::UPThread
- upwardClicked() : BALL::VIEW::DockResultDialog
- useCompileAndExecuteMode() : BALL::VIEW::GLDisplayList
- useCompileMode() : BALL::VIEW::GLDisplayList
- useContinuousLoop() : BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::RTfactRenderer
- useFormalCharges() : BALL::Kekuliser
- useMicroCanonical() : BALL::VIEW::MolecularDynamicsDialog
- useMultithreading() : BALL::VIEW::MainControl
- usePreview() : BALL::VIEW::Scene
- usesReceptorResidues() : BALL::PharmacophoreConstraint
- useVertexBuffers() : BALL::VIEW::Scene