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BALL::ReferenceArea Member List

This is the complete list of members for BALL::ReferenceArea, including all inherited members.

BALL::DockingAlgorithm class | BALL::ReferenceArea | friend
BALL::VIEW::DockRLDialog class | BALL::ReferenceArea | friend
calculateScore(AtomContainer *mol) | BALL::ReferenceArea | virtual
Constraint() | BALL::Constraint |
createBoundaryMolecule() | BALL::ReferenceArea |
enlarge(double angstroem) | BALL::ReferenceArea |
getContainedAtoms() | BALL::ReferenceArea |
getName() | BALL::Constraint |
getType() | BALL::Constraint |
name_ | BALL::Constraint | protected
penalty_ | BALL::Constraint | protected
ReferenceArea() | BALL::ReferenceArea |
ReferenceArea(Vector3 &p1, Vector3 &p2, Vector3 &p3, Vector3 &p4, bool atom_fraction, double atoms, double penalty) | BALL::ReferenceArea |
ReferenceArea(Vector3 &p1, Vector3 &p2, int y_expansion, int z_expansion, bool atom_fraction, double atoms, double penalty) | BALL::ReferenceArea |
ReferenceArea(const AtomContainer *sys, bool atom_fraction, double atoms, double penalty) | BALL::ReferenceArea |
ReferenceArea(list< const AtomContainer * > &container_list, const list< String > &interaction_types, double desired_interaction_score, double penalt) | BALL::ReferenceArea |
scoring_function_ | BALL::Constraint | protected
setName(String name) | BALL::ReferenceArea | virtual
setNumberDesiredAtoms(double d) | BALL::ReferenceArea |
setScoringFunction(ScoringFunction *sf) | BALL::ReferenceArea | virtual
type_ | BALL::Constraint | protected
~Constraint() | BALL::Constraint | virtual
~ReferenceArea() | BALL::ReferenceArea |