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Here is a list of all functions with links to the classes they belong to:

### - e -

- earthMoversDistance() : BALL::Spectrum< DataT, PeakT, PositionT >
- EdgeComparator_() : BALL::FPTBondOrderStrategy::EdgeComparator_
- edgeIncreaseByEliminating() : BALL::TreeWidthImplementation< UndirectedGraph >::FillInHeuristic
- EdgeItem() : BALL::EdgeItem< Node, Edge >
- editableCopy() : BALL::MolecularGraph
- EditableEdgeCopier() : BALL::GRAPH::EditableEdgeCopier< Graph1, Graph2 >
- EditableVertexCopier() : BALL::GRAPH::EditableVertexCopier< Graph1, Graph2 >
- editAmbientColor() : BALL::VIEW::MaterialSettings
- editColor() : BALL::VIEW::LabelDialog
- EditMode() : BALL::VIEW::EditMode
- EditOperation() : BALL::VIEW::EditOperation
- editReflectivenessColor() : BALL::VIEW::MaterialSettings
- editSelectionColor() : BALL::VIEW::DisplayProperties
- EditSettings() : BALL::VIEW::EditSettings
- EditSingleShortcut() : BALL::VIEW::EditSingleShortcut
- editSpecularityColor() : BALL::VIEW::MaterialSettings
- editSuccess_() : BALL::VIEW::ShortcutTableView
- EFShiftProcessor() : BALL::EFShiftProcessor
- Electrostatic() : BALL::Electrostatic
- ElectrostaticPotentialCalculator() : BALL::ElectrostaticPotentialCalculator
- Element() : BALL::Element
- elementChoosen_() : BALL::VIEW::PTEDialog
- elementClicked_() : BALL::VIEW::PTEDialog
- ElementColorProcessor() : BALL::VIEW::ElementColorProcessor
- Embeddable() : BALL::Embeddable
- emitHeadChange() : BALL::VIEW::InputDeviceDriver
- emitPositionChange() : BALL::VIEW::InputDeviceDriver
- EmpiricalHSShiftProcessor() : BALL::EmpiricalHSShiftProcessor
- empty() : BALL::PDBRecords, BALL::String, BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- enable() : BALL::PeriodicBoundary, BALL::ResidueChecker, BALL::ScoreGridSet, BALL::ScoringComponent
- enableAllComponents_() : BALL::ScoringFunction
- enableAtoms() : BALL::SDFile
- enableBallAndStickModel() : BALL::VIEW::AddBallAndStickModel
- enableChargeEvaluation() : BALL::HydrogenBond
- enableColoringUpdate() : BALL::VIEW::Representation
- enableCreationForNewMolecules() : BALL::VIEW::DisplayProperties
- enableDashedBonds() : BALL::VIEW::AddBallAndStickModel
- enableDCDFileSelected() : BALL::VIEW::MolecularDynamicsDialog
- enableEnergyAbortCondition() : BALL::EnergyMinimizer, BALL::MolecularDynamics
- enableInteractionComponents_() : BALL::ScoringFunction
- enableLoggingToFile() : BALL::VIEW::MainControl, BALL::VIEW::MainControlPreferences
- enableModelUpdate() : BALL::VIEW::Representation
- enableOutput() : BALL::LogStream
- enableOutputCompression() : BALL::GenericMolFile
- enableRibbons() : BALL::VIEW::AddCartoonModel
- enableSavingBestPoses() : BALL::GridAnalysis
- enableSelection() : BALL::ForceField, BALL::ResidueChecker
- enableStickModel() : BALL::VIEW::AddBallAndStickModel
- enableStoreInteractions() : BALL::AmberNonBonded, BALL::Atom, BALL::ScoringFunction
- enableStoreInteractionsOnlyForPhContraints() : BALL::ScoringFunction
- enableTransformation() : BALL::File
- enableTrimWhitespaces() : BALL::LineBasedFile
- enableUpdates_() : BALL::VIEW::MolecularControl
- enableVelocityStorage() : BALL::DCDFile
- enableVertexBuffers() : BALL::VIEW::GLRenderer
- encodeBase64() : BALL::String
- end() : BALL::AtomVector, BALL::BidirectionalIterator< Container, DataType, Position, Traits >, BALL::ConnectedToPredicate::CTPNode, BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >, BALL::ConstForwardIterator< Container, DataType, Position, Traits >, BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >, BALL::Enumerator< Container, SiteIterator, Variant >, BALL::ExpressionParser::SyntaxTree, BALL::ForwardIterator< Container, DataType, Position, Traits >, BALL::FPTBondOrderStrategy::DPTable_, BALL::Gradient, BALL::HashSet< Key >, BALL::NodeItem< Node, Edge >, BALL::PDBRecords, BALL::RandomAccessIterator< Container, DataType, Position, Traits >, BALL::ResidueRotamerSet, BALL::ResourceEntry, BALL::ResourceFile, BALL::SmartsParser::SPNode, BALL::String, BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >, BALL::VIEW::CompositeManager, BALL::VIEW::RepresentationManager
- endAncestor() : BALL::Composite
- endBond() : BALL::Atom
- endBox() : BALL::HashGrid3< Item >, BALL::HashGridBox3< Item >
- endChildComposite() : BALL::Composite
- endChildPredicates() : BALL::GAFFCESParser
- endComposite() : BALL::Composite
- endContactFace() : BALL::SolventExcludedSurface
- endData() : BALL::HashGridBox3< Item >
- endDefinition() : BALL::VIEW::GLDisplayList
- endEdge() : BALL::GraphFace< Vertex, Edge, Face >, BALL::GraphVertex< Vertex, Edge, Face >, BALL::SolventExcludedSurface, BALL::TriangulatedSurface, BALL::TSimpleMolecularGraph< Node, Edge >
- endEntry() : BALL::QSAR::Registry
- endFace() : BALL::GraphVertex< Vertex, Edge, Face >
- endNamedProperty() : BALL::PropertyManager
- endNode() : BALL::TSimpleMolecularGraph< Node, Edge >
- endOrientation() : BALL::SASFace
- endOutput() : BALL::PersistenceManager
- endPoint() : BALL::TriangulatedSurface
- endSingularEdge() : BALL::SolventExcludedSurface
- endSphericFace() : BALL::SolventExcludedSurface
- endSubcategories() : BALL::Options
- endToricFace() : BALL::SolventExcludedSurface
- endTriangle() : BALL::TriangulatedSurface
- endVertex() : BALL::GraphFace< Vertex, Edge, Face >, BALL::SolventExcludedSurface
- EnergeticEvaluation() : BALL::EnergeticEvaluation
- energyAbortConditionEnabled() : BALL::EnergyMinimizer, BALL::MolecularDynamics
- EnergyMinimizer() : BALL::EnergyMinimizer
- EnergyMinimizerThread() : BALL::VIEW::EnergyMinimizerThread
- EnergyProcessor() : BALL::EnergyProcessor
- enlarge() : BALL::ReferenceArea
- enterActiveStereo() : BALL::VIEW::Scene
- enterDualStereo() : BALL::VIEW::Scene
- enterDualStereoDifferentDisplays() : BALL::VIEW::Scene
- enterMoveMode() : BALL::VIEW::GeometricControl
- enterPickingMode() : BALL::VIEW::GLRenderer, BALL::VIEW::Scene
- enterStereo() : BALL::VIEW::Scene
- enterWhatsThisMode() : BALL::VIEW::HelpViewer
- EntryInformation() : BALL::NMRStarFile::EntryInformation
- entrySelected() : BALL::VIEW::Preferences
- Enumerator() : BALL::Enumerator< Container, SiteIterator, Variant >
- EnumeratorIndex() : BALL::EnumeratorIndex
- environmentMapChanged() : BALL::VIEW::StageSettings
- equals() : BALL::SmartsParser::SPAtom, BALL::SmartsParser::SPBond
- equalSpaceDiscretization() : BALL::QSAR::ClassificationModel
- equalSpaceDiscretizationTestData() : BALL::QSAR::ClassificationModel
- erase() : BALL::HashSet< Key >, BALL::PDBRecords, BALL::Result, BALL::String
- eraseNCS() : BALL::CrystalInfo
- error() : BALL::ForceField, BALL::LogStream, BALL::SimpleDownloaderHelper::BasicHelper
- errorInGL() : BALL::VIEW::GLRenderWindow
- estimateAtomTypePenalty_() : BALL::PartialBondOrderAssignment
- estimateBondLengthPenalty_() : BALL::PartialBondOrderAssignment
- estimateBondOrders_() : BALL::BuildBondsProcessor
- estimatePenalty_() : BALL::PartialBondOrderAssignment
- euclDistance() : BALL::QSAR::Statistics
- euclNorm() : BALL::QSAR::Statistics
- evaluate() : BALL::RuleProcessor, BALL::ScoringOptimizer
- evaluate_() : BALL::SmartsMatcher
- evaluate_edge_() : BALL::SmartsMatcher
- evaluate_node_() : BALL::SmartsMatcher
- evaluateBSpline() : BALL::VIEW::AddBackboneModel
- evaluatePenalty() : BALL::AssignBondOrderProcessor
- evaluateRingEdges_() : BALL::SmartsMatcher
- evenSplit() : BALL::QSAR::QSARData
- event() : BALL::VIEW::MainControl, BALL::VIEW::TestFramework
- eventFilter() : BALL::VIEW::HelpViewer, BALL::VIEW::LogView, BALL::VIEW::PeptideDialog, BALL::VIEW::Scene, BALL::VIEW::TestFramework
- EvolutionaryDocking() : BALL::EvolutionaryDocking
- exec() : BALL::VIEW::ClippingDialog, BALL::VIEW::ContourSurfaceDialog, BALL::VIEW::DockDialog, BALL::VIEW::ExportGeometryDialog, BALL::VIEW::GridVisualizationDialog
- execScript() : BALL::VIEW::PyWidget
- execute() : BALL::PyCAPIKernel, BALL::PyInterpreter, BALL::PyKernel
- executeLink() : BALL::VIEW::HTMLPage
- exitPickingMode() : BALL::VIEW::GLRenderer, BALL::VIEW::Scene
- exitStereo() : BALL::VIEW::Scene
- exitWhatsThisMode() : BALL::VIEW::HelpViewer
- expandAll() : BALL::VIEW::MolecularControl
- expandPrefix_() : BALL::LogStreamBuf
- expect() : BALL::TextPersistenceManager
- Experiment() : BALL::Experiment< PeakListType >
- export_stl() : BALL::VIEW::ExportGeometryDialog
- export_vrml() : BALL::VIEW::ExportGeometryDialog
- exportClusterTreeToJSON() : BALL::PoseClustering
- ExportGeometryDialog() : BALL::VIEW::ExportGeometryDialog
- exportHistory() : BALL::VIEW::PyWidget
- exportImage_() : BALL::VIEW::SDWidget
- exportNextPOVRay() : BALL::VIEW::Scene
- exportPNG() : BALL::VIEW::RenderSetup, BALL::VIEW::Scene
- exportPNGAfterTTL() : BALL::VIEW::RenderSetup
- exportPOVRay() : BALL::VIEW::Scene
- exportScene() : BALL::VIEW::Scene
- exportSceneToPNG_() : BALL::VIEW::SimulationThread
- exportSurface() : BALL::TriangulatedSurface
- exportToJSONDFS_() : BALL::PoseClustering
- exportWardClusterTreeToGraphViz() : BALL::PoseClustering
- Expression() : BALL::Expression
- ExpressionParser() : BALL::ExpressionParser
- ExpressionPredicate() : BALL::ExpressionPredicate
- ExpressionTree() : BALL::ExpressionTree
- ExtendedPreferencesObject() : BALL::VIEW::PreferencesEntry::ExtendedPreferencesObject
- extendState() : BALL::FPTBondOrderStrategy::DPBackTracking_
- extractClustersForThreshold() : BALL::PoseClustering
- extractNBestClusters() : BALL::PoseClustering
- extractSection() : BALL::AtomTypes, BALL::CharmmEEF1, BALL::ClaverieParameter, BALL::CosineTorsion, BALL::LennardJones, BALL::ParameterSection, BALL::Potential1210, BALL::QuadraticAngleBend, BALL::QuadraticBondStretch, BALL::QuadraticImproperTorsion, BALL::RDFParameter, BALL::RDFSection, BALL::ResidueTorsions, BALL::SolventParameter, BALL::Templates
- extractSection_() : BALL::RuleEvaluator
- extractSpaceGroup() : BALL::SpaceGroupParameters
- extractStructure_() : BALL::PDBFile