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Here is a list of all functions with links to the classes they belong to:

### - m -

- MainControl() : BALL::VIEW::MainControl
- MainControlPreferences() : BALL::VIEW::MainControlPreferences
- makeAllXNatural() : BALL::CubicSpline2D
- makeCurrent() : BALL::VIEW::RenderSetup
- makeDependentOn() : BALL::VIEW::RenderSetup
- makeDockingResult() : BALL::Result
- makeFFTGrid_() : BALL::GeometricFit
- makeLigandImportResult() : BALL::Result
- makeNatural() : BALL::CubicSpline1D
- makeNice() : BALL::TreeWidthImplementation< UndirectedGraph >::TreeDecompositionBuilder< OriginalGraphType >
- makeReceptorImportResult() : BALL::Result
- makeRescoringResult() : BALL::Result
- makeXNatural() : BALL::CubicSpline2D
- makeYNatural() : BALL::CubicSpline2D
- manipulateY() : BALL::QSAR::QSARData
- map() : BALL::VIEW::ColorMap, BALL::VIEW::PyWidget
- map3DToViewport() : BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::Scene, BALL::VIEW::TilingRenderer
- mapCompounds() : BALL::DockingAlgorithm
- mapFragments() : BALL::StructureMapper
- mapInverse_() : BALL::TRegularData3D< ValueType >
- mapLigandOntoReferenceLigand() : BALL::DockingAlgorithm
- mapProteins() : BALL::StructureMapper, BALL::VIEW::MolecularStructure
- mapResiduesByBackbone() : BALL::StructureMapper
- mapThreeVectors() : BALL::ReconstructFragmentProcessor
- mapToCartesian_() : BALL::TRegularData3D< ValueType >
- mapViewplaneToScreen_() : BALL::VIEW::GLRenderer
- mapViewportTo3D() : BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::Scene, BALL::VIEW::TilingRenderer
- match() : BALL::GAFFCESParser::CESelementConnectionPredicate, BALL::GAFFCESParser::CESelementPredicate, BALL::GAFFCESParser::CESPredicate, BALL::GAFFCESParser::CESwildcardsConnectionPredicate, BALL::GAFFCESParser::CESwildcardsPredicate, BALL::GAFFCESParser, BALL::GAFFCESParser::TruePredicate, BALL::RegularExpression, BALL::SmartsMatcher
- matchBackboneAtoms() : BALL::StructureMapper
- matches() : BALL::Peptides::NameConverter
- matchName() : BALL::FragmentDB::NormalizeNamesProcessor
- matchPoints() : BALL::StructureMapper
- matchWildcards() : BALL::GAFFCESParser::CESwildcardsConnectionPredicate, BALL::GAFFCESParser::CESwildcardsPredicate
- mate() : BALL::DoubleGene, BALL::GenericGene, BALL::GeneticAlgorithm, BALL::GeneticIndividual, BALL::QuaternionGene
- Material() : BALL::VIEW::Stage::Material
- MaterialSettings() : BALL::VIEW::MaterialSettings
- max_size() : BALL::PDBRecords, BALL::String, BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- maxAlphaChanged() : BALL::VIEW::GridColorWidget
- maxColorChanged() : BALL::VIEW::GridColorWidget
- maxDistanceChanged() : BALL::VIEW::ColoringSettingsDialog
- maxMaxAlphaChanged() : BALL::VIEW::GridColorWidget
- maxMaxColorChanged() : BALL::VIEW::GridColorWidget
- maxTFChanged() : BALL::VIEW::ColoringSettingsDialog
- MDSimulation() : BALL::VIEW::MolecularStructure
- MDSimulationThread() : BALL::VIEW::MDSimulationThread
- MeanAtomInformationContent() : BALL::MeanAtomInformationContent
- menuItemHighlighted() : BALL::VIEW::MainControl
- merge() : BALL::VIEW::Scene
- merge_() : BALL::VIEW::EditMode
- mergeChildrenOf() : BALL::ResourceEntry
- Mesh() : BALL::VIEW::Mesh
- MeshBuffer() : BALL::VIEW::MeshBuffer
- Message() : BALL::VIEW::Message
- MessageEvent() : BALL::VIEW::MessageEvent
- met_pressed() : BALL::VIEW::PeptideDialog
- metric() : BALL::VIEW::GLOffscreenTarget
- MicroCanonicalMD() : BALL::MicroCanonicalMD
- midAlphaChanged() : BALL::VIEW::GridColorWidget
- midColorChanged() : BALL::VIEW::GridColorWidget
- minAlphaChanged() : BALL::VIEW::GridColorWidget
- minColorChanged() : BALL::VIEW::GridColorWidget
- MinimizationDialog() : BALL::VIEW::MinimizationDialog
- minimize() : BALL::ConjugateGradientMinimizer, BALL::EnergyMinimizer, BALL::LineSearch, BALL::ShiftedLVMMMinimizer, BALL::SteepestDescentMinimizer, BALL::StrangLBFGSMinimizer
- minimizeRMSD() : BALL::RMSDMinimizer
- minMinAlphaChanged() : BALL::VIEW::GridColorWidget
- minMinColorChanged() : BALL::VIEW::GridColorWidget
- MinorMinWidthCriterion() : BALL::TreeWidthImplementation< UndirectedGraph >::MinorMinWidthCriterion
- MinorMinWidthReducer() : BALL::TreeWidthImplementation< UndirectedGraph >::MinorMinWidthReducer
- MLRModel() : BALL::QSAR::MLRModel
- MMFF94() : BALL::MMFF94
- MMFF94AtomType() : BALL::MMFF94AtomType
- MMFF94AtomTypeEquivalences() : BALL::MMFF94AtomTypeEquivalences
- MMFF94AtomTyper() : BALL::MMFF94AtomTyper
- MMFF94AtomTypes() : BALL::MMFF94AtomTypes
- MMFF94BendParameters() : BALL::MMFF94BendParameters
- MMFF94ChargeProcessor() : BALL::MMFF94ChargeProcessor
- MMFF94ConfigurationDialog() : BALL::VIEW::MMFF94ConfigurationDialog
- MMFF94ESParameters() : BALL::MMFF94ESParameters
- MMFF94NonBonded() : BALL::MMFF94NonBonded
- MMFF94OutOfPlaneBend() : BALL::MMFF94OutOfPlaneBend
- MMFF94ParametersBase() : BALL::MMFF94ParametersBase
- MMFF94PlaneParameters() : BALL::MMFF94PlaneParameters
- MMFF94StretchBend() : BALL::MMFF94StretchBend
- MMFF94StretchBendParameters() : BALL::MMFF94StretchBendParameters
- MMFF94StretchParameters() : BALL::MMFF94StretchParameters
- MMFF94Torsion() : BALL::MMFF94Torsion
- MMFF94TorsionParameters() : BALL::MMFF94TorsionParameters
- MMFF94VDWParameters() : BALL::MMFF94VDWParameters
- MMScoring() : BALL::MMScoring
- modeChanged() : BALL::VIEW::LabelDialog
- modeChanged_() : BALL::VIEW::EditSingleShortcut
- modeChangeSlot_() : BALL::VIEW::InteractionMode
- Model() : BALL::QSAR::Model
- ModelConfiguration() : BALL::QSAR::ModelConfiguration
- ModelInformation() : BALL::VIEW::ModelInformation
- modelMustBeRebuild() : BALL::VIEW::ModelInformation
- modelMuteableByDisplayProperties() : BALL::VIEW::ModelInformation
- modelOptionsPressed() : BALL::VIEW::DisplayProperties
- ModelParameterError() : BALL::QSAR::Exception::ModelParameterError
- ModelPart() : BALL::VIEW::AddBackboneModel::ModelPart
- ModelProcessor() : BALL::VIEW::ModelProcessor
- ModelSettingsDialog() : BALL::VIEW::ModelSettingsDialog
- modelUpdateEnabled() : BALL::VIEW::Representation
- modelUpdatesChanged() : BALL::VIEW::DisplayProperties
- modifyHotkeys() : BALL::VIEW::PyWidget
- ModifyRepresentationDialog() : BALL::VIEW::ModifyRepresentationDialog
- modifyRepresentationMode() : BALL::VIEW::DisplayProperties
- ModularWidget() : BALL::VIEW::ModularWidget
- ModularWidgetPluginHandler() : BALL::VIEW::ModularWidgetPluginHandler
- MOL2File() : BALL::MOL2File
- MolecularControl() : BALL::VIEW::MolecularControl
- MolecularDynamics() : BALL::MolecularDynamics
- MolecularDynamicsDialog() : BALL::VIEW::MolecularDynamicsDialog
- MolecularFileDialog() : BALL::VIEW::MolecularFileDialog
- MolecularGraph() : BALL::MolecularGraph
- MolecularInformation() : BALL::MolecularInformation
- MolecularInteractions() : BALL::MolecularInteractions
- MolecularSimilarity() : BALL::MolecularSimilarity
- MolecularStructure() : BALL::VIEW::MolecularStructure
- MolecularSystem() : BALL::NMRStarFile::MolecularSystem
- MolecularTaskMessage() : BALL::VIEW::MolecularTaskMessage
- MolecularWeight() : BALL::MolecularWeight
- Molecule() : BALL::Molecule
- MoleculeColorProcessor() : BALL::VIEW::MoleculeColorProcessor
- MoleculeIteratorTraits() : BALL::MoleculeIteratorTraits
- MoleculeObjectCreator() : BALL::MoleculeObjectCreator
- MOLFile() : BALL::MOLFile
- MonomericPolymer() : BALL::NMRStarFile::MonomericPolymer
- MOPACInputFile() : BALL::MOPACInputFile
- MOPACOutputFile() : BALL::MOPACOutputFile
- MotionTrackingEvent() : BALL::VIEW::MotionTrackingEvent
- motionTrackingEvent() : BALL::VIEW::Scene
- mouseDoubleClickEvent() : BALL::VIEW::EditMode, BALL::VIEW::InteractionMode, BALL::VIEW::InteractionModeManager, BALL::VIEW::PickingMode, BALL::VIEW::RotateMode, BALL::VIEW::Scene
- mouseMoveEvent() : BALL::VIEW::InteractionMode, BALL::VIEW::InteractionModeManager, BALL::VIEW::Scene
- mouseMoveEventImpl_() : BALL::VIEW::EditMode, BALL::VIEW::InteractionMode, BALL::VIEW::MoveMode, BALL::VIEW::PickingMode, BALL::VIEW::RotateMode
- mousePressEvent() : BALL::VIEW::InteractionMode, BALL::VIEW::InteractionModeManager, BALL::VIEW::Scene
- mousePressEventImpl_() : BALL::VIEW::EditMode, BALL::VIEW::InteractionMode, BALL::VIEW::PickingMode
- mouseReleaseEvent() : BALL::VIEW::InteractionMode, BALL::VIEW::InteractionModeManager, BALL::VIEW::Scene
- mouseReleaseEventImpl_() : BALL::VIEW::EditMode, BALL::VIEW::InteractionMode, BALL::VIEW::MoveMode, BALL::VIEW::PickingMode, BALL::VIEW::RotateMode
- move() : BALL::DockProblem, BALL::File, BALL::VIEW::Scene
- moveAtomTriggered_() : BALL::VIEW::MoveMode
- moveComposites() : BALL::VIEW::Scene
- moveForward() : BALL::VIEW::Camera
- moveItems() : BALL::VIEW::GeometricControl, BALL::VIEW::MolecularControl
- MoveMode() : BALL::VIEW::MoveMode
- moveProbeGroup_() : BALL::GridAnalysis
- moveRight() : BALL::VIEW::Camera
- moveTo() : BALL::AtomVector, BALL::File, BALL::ScoreGridSet
- moveUp() : BALL::VIEW::Camera
- MPISupport() : BALL::MPISupport
- MultiColorExtension() : BALL::VIEW::MultiColorExtension
- multiDemeCheck() : BALL::GeneticAlgorithm
- MultiLine() : BALL::VIEW::MultiLine
- MutableConstant() : BALL::MutableConstant< DataType >
- MutablePower() : BALL::MutablePower< Function, DataType >
- mutate() : BALL::DoubleGene, BALL::GenericGene, BALL::GeneticAlgorithm, BALL::Mutator, BALL::QuaternionGene
- mutate_() : BALL::Enumerator< Container, SiteIterator, Variant >
- mutate_impl_() : BALL::DNAMutator, BALL::Mutator
- Mutator() : BALL::Mutator
- mySleep() : BALL::VIEW::AnimationThread
- MyTextBrowser() : BALL::VIEW::MyTextBrowser